mm9_v1_chr17_-_57226987_57227204	40.1941	HOX{A5,B5}.p2	BC054831|Tubb4|22153|tubulin, beta 4	AK013717|Tubb4|22153|tubulin, beta 4	BC049112|Tubb4|22153|tubulin, beta 4	NM_009451|Tubb4|22153|tubulin, beta 4
mm9_v1_chr8_-_73011217_73011286	15.2585	HOX{A5,B5}.p2	AK005155|Tmem59l|67937|transmembrane protein 59-like	BC056172|Tmem59l|67937|transmembrane protein 59-like	NM_182991|Tmem59l|67937|transmembrane protein 59-like
mm9_v1_chr9_-_35365985_35366129	13.7788	HOX{A5,B5}.p2	AF142630|Ddx25|30959|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25	BC024852|Ddx25|30959|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25	BC061130|Ddx25|30959|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25	AK078340|Ddx25|30959|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25	AK050693|Ddx25|30959|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25	NM_013932|Ddx25|30959|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25
mm9_v1_chr11_+_56825307_56825536	13.7746	HOX{A5,B5}.p2	AK049958|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	BC056397|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	AB102773|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	AB102774|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	BC060702|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chrX_+_133357268_133357438	13.5542	HOX{A5,B5}.p2	AK160872|Plp1|18823|proteolipid protein (myelin) 1	AK134554|Plp1|18823|proteolipid protein (myelin) 1	M15442|Plp1|18823|proteolipid protein (myelin) 1	AK077564|Plp1|18823|proteolipid protein (myelin) 1	BC027010|Plp1|18823|proteolipid protein (myelin) 1	NM_011123|Plp1|18823|proteolipid protein (myelin) 1	AK192772|Plp1|18823|proteolipid protein (myelin) 1	AK203421|Plp1|18823|proteolipid protein (myelin) 1
mm9_v1_chr13_+_54472806_54472829	13.4065	HOX{A5,B5}.p2	BC058395|Cplx2|12890|complexin 2
mm9_v1_chr11_+_56825258_56825293	13.2049	HOX{A5,B5}.p2	X57497|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr12_-_80084464_80084464	12.098	HOX{A5,B5}.p2	BC057677|Tmem229b|268567|transmembrane protein 229B	NM_001170401|Tmem229b|268567|transmembrane protein 229B
mm9_v1_chr10_-_80477630_80477676	11.7394	HOX{A5,B5}.p2	AK147843|Gng7|14708|guanine nucleotide binding protein (G protein), gamma 7	AK141541|Gng7|14708|guanine nucleotide binding protein (G protein), gamma 7	AK177829|Gng7|14708|guanine nucleotide binding protein (G protein), gamma 7	AY035844|Gng7|14708|guanine nucleotide binding protein (G protein), gamma 7	NM_010319|Gng7|14708|guanine nucleotide binding protein (G protein), gamma 7
mm9_v1_chr11_+_56825192_56825257	11.7364	HOX{A5,B5}.p2	NM_001113325|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	NM_008165|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr6_+_145070255_145070333	11.7271	HOX{A5,B5}.p2	AK040180|Lrmp|16970|lymphoid-restricted membrane protein	NM_008511|Lrmp|16970|lymphoid-restricted membrane protein	AK153823|Lrmp|16970|lymphoid-restricted membrane protein	AK160009|Lrmp|16970|lymphoid-restricted membrane protein	AK050646|Lrmp|16970|lymphoid-restricted membrane protein	AK079932|Lrmp|16970|lymphoid-restricted membrane protein	BC052909|Lrmp|16970|lymphoid-restricted membrane protein
mm9_v1_chr2_+_177876635_177876639	11.1924	HOX{A5,B5}.p2	AK135144|Phactr3|74189|phosphatase and actin regulator 3	NM_028806|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr12_-_36768992_36769002	10.8674	HOX{A5,B5}.p2	AK008175|Tspan13|66109|tetraspanin 13
mm9_v1_chr5_-_143084635_143084646	10.069	HOX{A5,B5}.p2	AY134664|Mmd2|75104|monocyte to macrophage differentiation-associated 2
mm9_v1_chr5_-_143084677_143084746	9.83859	HOX{A5,B5}.p2	AY424299|Mmd2|75104|monocyte to macrophage differentiation-associated 2	BC025064|Mmd2|75104|monocyte to macrophage differentiation-associated 2	NM_175217|Mmd2|75104|monocyte to macrophage differentiation-associated 2
mm9_v1_chr19_-_45890238_45890540	9.81012	HOX{A5,B5}.p2	AJ278536|Kcnip2|80906|Kv channel-interacting protein 2	AJ278537|Kcnip2|80906|Kv channel-interacting protein 2	AF439339|Kcnip2|80906|Kv channel-interacting protein 2	AF439340|Kcnip2|80906|Kv channel-interacting protein 2	AF439341|Kcnip2|80906|Kv channel-interacting protein 2	DQ148496|Kcnip2|80906|Kv channel-interacting protein 2	DQ148497|Kcnip2|80906|Kv channel-interacting protein 2	DQ148498|Kcnip2|80906|Kv channel-interacting protein 2	NM_030716|Kcnip2|80906|Kv channel-interacting protein 2	NM_145703|Kcnip2|80906|Kv channel-interacting protein 2	NM_145704|Kcnip2|80906|Kv channel-interacting protein 2	BC132215|Kcnip2|80906|Kv channel-interacting protein 2	BC138496|Kcnip2|80906|Kv channel-interacting protein 2	BC056434|Kcnip2|80906|Kv channel-interacting protein 2
mm9_v1_chr12_-_36769054_36769127	9.62146	HOX{A5,B5}.p2	BC018317|Tspan13|66109|tetraspanin 13	NM_025359|Tspan13|66109|tetraspanin 13	AK158761|Tspan13|66109|tetraspanin 13	AK167979|Tspan13|66109|tetraspanin 13	AK012571|Tspan13|66109|tetraspanin 13	AK090217|Tspan13|66109|tetraspanin 13	AK090322|Tspan13|66109|tetraspanin 13	AK165768|Tspan13|66109|tetraspanin 13	AK167495|Tspan13|66109|tetraspanin 13
mm9_v1_chr11_+_54117703_54117765	9.54448	HOX{A5,B5}.p2	BC022959|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AK147421|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	NM_001033597|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	NM_144823|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AY167035|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AY786361|Acsl6|216739|acyl-CoA synthetase long-chain family member 6
mm9_v1_chr7_+_31092787_31092817	9.48023	HOX{A5,B5}.p2	BC058124|Clip3|76686|CAP-GLY domain containing linker protein 3
mm9_v1_chr2_-_113669229_113669239	9.27057	HOX{A5,B5}.p2	BC029021|Scg5|20394|secretogranin V
mm9_v1_chr11_+_87032504_87032509	9.04199	HOX{A5,B5}.p2	AK004018|Trim37|68729|tripartite motif-containing 37
mm9_v1_chr7_-_31935974_31936116	8.8647	HOX{A5,B5}.p2	AK150032|Gramd1a|52857|GRAM domain containing 1A	AK150196|Gramd1a|52857|GRAM domain containing 1A	AK150837|Gramd1a|52857|GRAM domain containing 1A	AK151987|Gramd1a|52857|GRAM domain containing 1A	AK152294|Gramd1a|52857|GRAM domain containing 1A	AK083837|Gramd1a|52857|GRAM domain containing 1A	AK004885|Gramd1a|52857|GRAM domain containing 1A	AK154821|Gramd1a|52857|GRAM domain containing 1A	NM_027898|Gramd1a|52857|GRAM domain containing 1A
mm9_v1_chr11_-_41996141_41996431	8.68749	HOX{A5,B5}.p2	AK141596|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	AK034095|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	NM_010250|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm9_v1_chr15_+_89284625_89284629	8.56738	HOX{A5,B5}.p2	AF220195|Mapk8ip2|60597|mitogen-activated protein kinase 8 interacting protein 2
mm9_v1_chr6_+_114232618_114232629	8.53488	HOX{A5,B5}.p2	NM_178703|Slc6a1|232333|solute carrier family 6 (neurotransmitter transporter, GABA), member 1
mm9_v1_chr2_+_177876710_177876721	8.47493	HOX{A5,B5}.p2	BC058621|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr9_-_75459046_75459076	8.45233	HOX{A5,B5}.p2	AF177170|Tmod2|50876|tropomodulin 2
mm9_v1_chr2_+_164793698_164793753	8.33589	HOX{A5,B5}.p2	AK165769|Slc12a5|57138|solute carrier family 12, member 5	AK122460|Slc12a5|57138|solute carrier family 12, member 5
mm9_v1_chr12_+_89961317_89961336	8.11021	HOX{A5,B5}.p2	AK078216|Nrxn3|18191|neurexin III	AK082055|Nrxn3|18191|neurexin III	NM_001198587|Nrxn3|18191|neurexin III	AK149250|Nrxn3|18191|neurexin III
mm9_v1_chr2_-_26883441_26883517	8.01377	HOX{A5,B5}.p2	BC058210|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	BC141168|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	BC145480|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	AK172411|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	AK079650|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	BC025498|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	AK150104|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	AK166312|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	AK163445|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	AK167904|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	AK137441|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	AK089246|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	NM_001177627|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	NM_172659|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6
mm9_v1_chr15_+_89284631_89284644	7.87311	HOX{A5,B5}.p2	AK014339|Mapk8ip2|60597|mitogen-activated protein kinase 8 interacting protein 2
mm9_v1_chr6_+_110595586_110595619	7.59599	HOX{A5,B5}.p2	BC080315|Grm7|108073|glutamate receptor, metabotropic 7	NM_177328|Grm7|108073|glutamate receptor, metabotropic 7
mm9_v1_chrX_-_161765324_161765332	7.05093	HOX{A5,B5}.p2	AK139335|Glra2|237213|glycine receptor, alpha 2 subunit
mm9_v1_chr13_+_88961034_88961117	7.00226	HOX{A5,B5}.p2	AF031525|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK046885|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	NM_001037987|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	NM_010103|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK157810|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK141907|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK135220|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK139093|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK036117|Edil3|13612|EGF-like repeats and discoidin I-like domains 3
mm9_v1_chr2_+_177876858_177876930	6.99539	HOX{A5,B5}.p2	BC059869|Phactr3|74189|phosphatase and actin regulator 3	AK032242|Phactr3|74189|phosphatase and actin regulator 3	AY501387|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr11_-_114862859_114862945	6.8721	HOX{A5,B5}.p2	BC111820|AF251705|140497|cDNA sequence AF251705	AB098476|AF251705|140497|cDNA sequence AF251705	AY457050|AF251705|140497|cDNA sequence AF251705	AB091768|AF251705|140497|cDNA sequence AF251705	AK154808|AF251705|140497|cDNA sequence AF251705	AK050008|AF251705|140497|cDNA sequence AF251705	AK079395|AF251705|140497|cDNA sequence AF251705	AB091767|AF251705|140497|cDNA sequence AF251705	BC006801|AF251705|140497|cDNA sequence AF251705
mm9_v1_chr13_+_54472705_54472742	6.61794	HOX{A5,B5}.p2	NM_009946|Cplx2|12890|complexin 2
mm9_v1_chr1_-_195196423_195196475	6.57119	HOX{A5,B5}.p2	AF428262|Camk1g|215303|calcium/calmodulin-dependent protein kinase I gamma	BC021840|Camk1g|215303|calcium/calmodulin-dependent protein kinase I gamma	NM_144817|Camk1g|215303|calcium/calmodulin-dependent protein kinase I gamma
mm9_v1_chr4_-_126430511_126430686	6.52815	HOX{A5,B5}.p2	BC017126|Ncdn|26562|neurochondrin	AK154889|Ncdn|26562|neurochondrin	AK170502|Ncdn|26562|neurochondrin	NM_011986|Ncdn|26562|neurochondrin
mm9_v1_chr5_+_150076605_150076688	6.46926	HOX{A5,B5}.p2	AK004002|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	BC026209|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	NM_009663|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	AK075967|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	M96554|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein
mm9_v1_chr6_+_51494591_51494699	6.37149	HOX{A5,B5}.p2	AK152004|Snx10|71982|sorting nexin 10
mm9_v1_chr7_+_108570222_108570257	6.34224	HOX{A5,B5}.p2	BC086800|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated
mm9_v1_chr4_-_141430740_141430891	6.24412	HOX{A5,B5}.p2	AK150207|Efhd2|27984|EF hand domain containing 2	AK007560|Efhd2|27984|EF hand domain containing 2	AK011219|Efhd2|27984|EF hand domain containing 2	AK159367|Efhd2|27984|EF hand domain containing 2	AK169409|Efhd2|27984|EF hand domain containing 2	AK167267|Efhd2|27984|EF hand domain containing 2	AK048475|Efhd2|27984|EF hand domain containing 2	NM_025994|Efhd2|27984|EF hand domain containing 2	BC125303|Efhd2|27984|EF hand domain containing 2
mm9_v1_chr14_-_66832383_66832388	6.19905	HOX{A5,B5}.p2	BC137704|Ptk2b|19229|PTK2 protein tyrosine kinase 2 beta	BC144849|Ptk2b|19229|PTK2 protein tyrosine kinase 2 beta	NM_001162366|Ptk2b|19229|PTK2 protein tyrosine kinase 2 beta
mm9_v1_chr9_-_75458954_75458978	6.06992	HOX{A5,B5}.p2	AK079077|Tmod2|50876|tropomodulin 2	AK164178|Tmod2|50876|tropomodulin 2
mm9_v1_chr4_+_132530088_132530093	6.00692	HOX{A5,B5}.p2	AK036438|Fgr|14191|Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog
mm9_v1_chr7_+_134439804_134439861	5.94496	HOX{A5,B5}.p2	AK156251|Itgal|16408|integrin alpha L	AK172394|Itgal|16408|integrin alpha L	AK154115|Itgal|16408|integrin alpha L	AK169628|Itgal|16408|integrin alpha L	NM_008400|Itgal|16408|integrin alpha L
mm9_v1_chr9_-_75458918_75458929	5.93852	HOX{A5,B5}.p2	AK018223|Tmod2|50876|tropomodulin 2
mm9_v1_chr9_-_53823107_53823121	5.93003	HOX{A5,B5}.p2	AK132239|Elmod1|270162|ELMO domain containing 1	NM_177769|Elmod1|270162|ELMO domain containing 1
mm9_v1_chr11_+_54117299_54117368	5.90353	HOX{A5,B5}.p2	AY786363|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AK147283|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	NM_001033598|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	BC016114|Acsl6|216739|acyl-CoA synthetase long-chain family member 6
mm9_v1_chr6_-_113451811_113451890	5.85579	HOX{A5,B5}.p2	BC058349|Prrt3|210673|proline-rich transmembrane protein 3	NM_172487|Prrt3|210673|proline-rich transmembrane protein 3	AK136854|Prrt3|210673|proline-rich transmembrane protein 3	AK045491|Prrt3|210673|proline-rich transmembrane protein 3	AK045678|Prrt3|210673|proline-rich transmembrane protein 3
mm9_v1_chr6_-_113451922_113451926	5.83931	HOX{A5,B5}.p2	AK031947|Prrt3|210673|proline-rich transmembrane protein 3
mm9_v1_chr6_+_114232767_114232820	5.63907	HOX{A5,B5}.p2	AK042956|Slc6a1|232333|solute carrier family 6 (neurotransmitter transporter, GABA), member 1	BC059080|Slc6a1|232333|solute carrier family 6 (neurotransmitter transporter, GABA), member 1	AK047663|Slc6a1|232333|solute carrier family 6 (neurotransmitter transporter, GABA), member 1	AK053831|Slc6a1|232333|solute carrier family 6 (neurotransmitter transporter, GABA), member 1	AK053798|Slc6a1|232333|solute carrier family 6 (neurotransmitter transporter, GABA), member 1	AK052971|Slc6a1|232333|solute carrier family 6 (neurotransmitter transporter, GABA), member 1	AK053883|Slc6a1|232333|solute carrier family 6 (neurotransmitter transporter, GABA), member 1
mm9_v1_chr2_+_49474840_49474940	5.5778	HOX{A5,B5}.p2	AK158884|Kif5c|16574|kinesin family member 5C	AB093244|Kif5c|16574|kinesin family member 5C
mm9_v1_chr6_+_137359231_137359310	5.46397	HOX{A5,B5}.p2	NM_001164402|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	NM_001164403|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	U37465|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	U37466|Ptpro|19277|protein tyrosine phosphatase, receptor type, O
mm9_v1_chr2_-_181049204_181049204	5.40686	HOX{A5,B5}.p2	AK032737|Stmn3|20262|stathmin-like 3	NM_009133|Stmn3|20262|stathmin-like 3
mm9_v1_chr10_+_72119562_72119594	5.38408	HOX{A5,B5}.p2	AK170637|Zwint|52696|ZW10 interactor
mm9_v1_chr7_-_51787440_51787440	5.36314	HOX{A5,B5}.p2	BC141118|Spib|272382|Spi-B transcription factor (Spi-1/PU.1 related)	NM_019866|Spib|272382|Spi-B transcription factor (Spi-1/PU.1 related)
mm9_v1_chr11_+_87607285_87607285	5.35058	HOX{A5,B5}.p2	NM_010824|Mpo|17523|myeloperoxidase
mm9_v1_chr1_+_133558486_133558487	5.12884	HOX{A5,B5}.p2	AK157907|Ctse|13034|cathepsin E	AK165242|Ctse|13034|cathepsin E
mm9_v1_chr11_+_87607531_87607556	5.05598	HOX{A5,B5}.p2	AY500847|Mpo|17523|myeloperoxidase
mm9_v1_chr17_-_57184507_57184537	5.02998	HOX{A5,B5}.p2	BC060049|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm9_v1_chr1_+_133558507_133558510	5.02814	HOX{A5,B5}.p2	AK143581|Ctse|13034|cathepsin E
mm9_v1_chr2_-_113669243_113669277	4.94209	HOX{A5,B5}.p2	AK019337|Scg5|20394|secretogranin V	NM_009162|Scg5|20394|secretogranin V	AK017481|Scg5|20394|secretogranin V
mm9_v1_chr5_-_141476549_141476556	4.92584	HOX{A5,B5}.p2	AK131134|Card11|108723|caspase recruitment domain family, member 11	NM_175362|Card11|108723|caspase recruitment domain family, member 11
mm9_v1_chr7_+_17460662_17460665	4.89454	HOX{A5,B5}.p2	DQ832319|Dact3|629378|dapper homolog 3, antagonist of beta-catenin (xenopus)	NM_001081655|Dact3|629378|dapper homolog 3, antagonist of beta-catenin (xenopus)
mm9_v1_chr5_-_103640272_103640352	4.88339	HOX{A5,B5}.p2	AK036275|Mapk10|26414|mitogen-activated protein kinase 10	BC046625|Mapk10|26414|mitogen-activated protein kinase 10	AK163206|Mapk10|26414|mitogen-activated protein kinase 10	AK076990|Mapk10|26414|mitogen-activated protein kinase 10	BC026697|Mapk10|26414|mitogen-activated protein kinase 10	AK082242|Mapk10|26414|mitogen-activated protein kinase 10	NM_001081567|Mapk10|26414|mitogen-activated protein kinase 10	NM_009158|Mapk10|26414|mitogen-activated protein kinase 10
mm9_v1_chr9_-_75459125_75459169	4.85703	HOX{A5,B5}.p2	AK147581|Tmod2|50876|tropomodulin 2	NM_016711|Tmod2|50876|tropomodulin 2
mm9_v1_chr1_+_133558517_133558572	4.83631	HOX{A5,B5}.p2	X97399|Ctse|13034|cathepsin E	AK165271|Ctse|13034|cathepsin E	CT010252|Ctse|13034|cathepsin E
mm9_v1_chr17_-_23908488_23908570	4.81646	HOX{A5,B5}.p2	AK168389|Flywch1|224613|FLYWCH-type zinc finger 1	NM_153791|Flywch1|224613|FLYWCH-type zinc finger 1
mm9_v1_chr6_-_58857000_58857134	4.79241	HOX{A5,B5}.p2	AB041556|Nap1l5|58243|nucleosome assembly protein 1-like 5	BC046332|Nap1l5|58243|nucleosome assembly protein 1-like 5	NM_021432|Nap1l5|58243|nucleosome assembly protein 1-like 5
mm9_v1_chr4_+_132530104_132530141	4.76379	HOX{A5,B5}.p2	AK038141|Fgr|14191|Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog	X52191|Fgr|14191|Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog	BC057863|Fgr|14191|Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog
mm9_v1_chr2_+_38194775_38194853	4.72534	HOX{A5,B5}.p2	BC086638|Lhx2|16870|LIM homeobox protein 2
mm9_v1_chr18_+_77424573_77424607	4.67185	HOX{A5,B5}.p2	AK013542|St8sia5|225742|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5	NM_013666|St8sia5|225742|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5	NM_153124|St8sia5|225742|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5	BC034855|St8sia5|225742|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
mm9_v1_chr3_+_87975676_87975677	4.61996	HOX{A5,B5}.p2	
mm9_v1_chr2_-_113669159_113669225	4.6176	HOX{A5,B5}.p2	AK031856|Scg5|20394|secretogranin V	AK011938|Scg5|20394|secretogranin V	AK003049|Scg5|20394|secretogranin V	AK161556|Scg5|20394|secretogranin V	AK161579|Scg5|20394|secretogranin V	AK005331|Scg5|20394|secretogranin V	X15830|Scg5|20394|secretogranin V
mm9_v1_chr15_+_89284554_89284573	4.57559	HOX{A5,B5}.p2	AF310135|Mapk8ip2|60597|mitogen-activated protein kinase 8 interacting protein 2	BC029704|Mapk8ip2|60597|mitogen-activated protein kinase 8 interacting protein 2
mm9_v1_chr1_+_165992203_165992294	4.54286	HOX{A5,B5}.p2	AK170753|Sell|20343|selectin, lymphocyte	NM_001164059|Sell|20343|selectin, lymphocyte	NM_011346|Sell|20343|selectin, lymphocyte	AK161754|Sell|20343|selectin, lymphocyte	AK157273|Sell|20343|selectin, lymphocyte	AK172116|Sell|20343|selectin, lymphocyte	BC052681|Sell|20343|selectin, lymphocyte	M25324|Sell|20343|selectin, lymphocyte	X14772|Sell|20343|selectin, lymphocyte	M36005|Sell|20343|selectin, lymphocyte	M36058|Sell|20343|selectin, lymphocyte	AK137509|Sell|20343|selectin, lymphocyte
mm9_v1_chr7_+_134439888_134439975	4.54019	HOX{A5,B5}.p2	AK155566|Itgal|16408|integrin alpha L	AK171389|Itgal|16408|integrin alpha L	M60778|Itgal|16408|integrin alpha L	BC145094|Itgal|16408|integrin alpha L	BC145095|Itgal|16408|integrin alpha L	BC145096|Itgal|16408|integrin alpha L	BC145802|Itgal|16408|integrin alpha L	AF065901|Itgal|16408|integrin alpha L	AF065902|Itgal|16408|integrin alpha L	AK152913|Itgal|16408|integrin alpha L
mm9_v1_chr7_+_150191542_150191714	4.38747	HOX{A5,B5}.p2	AK154694|Tspan32|27027|tetraspanin 32	NM_001128081|Tspan32|27027|tetraspanin 32	NM_001128082|Tspan32|27027|tetraspanin 32	NM_020286|Tspan32|27027|tetraspanin 32	AK171199|Tspan32|27027|tetraspanin 32	BC051204|Tspan32|27027|tetraspanin 32	BC055858|Tspan32|27027|tetraspanin 32	AK017989|Tspan32|27027|tetraspanin 32	AF291425|Tspan32|27027|tetraspanin 32	AJ279791|Tspan32|27027|tetraspanin 32	AJ279792|Tspan32|27027|tetraspanin 32	AJ279793|Tspan32|27027|tetraspanin 32	AJ279794|Tspan32|27027|tetraspanin 32	AJ279795|Tspan32|27027|tetraspanin 32	AF175771|Tspan32|27027|tetraspanin 32
mm9_v1_chr4_+_41836783_41836783	4.37032	HOX{A5,B5}.p2	NM_001085530|Gm13298|545611|predicted gene 13298
mm9_v1_chr17_+_56092075_56092253	4.33966	HOX{A5,B5}.p2	AK155023|Ebi3|50498|Epstein-Barr virus induced gene 3	BC008209|Ebi3|50498|Epstein-Barr virus induced gene 3	AK155903|Ebi3|50498|Epstein-Barr virus induced gene 3
mm9_v1_chr7_+_4085699_4085709	4.27339	HOX{A5,B5}.p2	AK081274|Ttyh1|57776|tweety homolog 1 (Drosophila)
mm9_v1_chr18_-_78320126_78320164	4.23403	HOX{A5,B5}.p2	NM_001171010|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	NM_028122|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1
mm9_v1_chr17_+_56092045_56092068	4.13706	HOX{A5,B5}.p2	NM_015766|Ebi3|50498|Epstein-Barr virus induced gene 3	AF013114|Ebi3|50498|Epstein-Barr virus induced gene 3
mm9_v1_chr10_-_7357774_7357973	4.13408	HOX{A5,B5}.p2	AK179354|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	S72473|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
mm9_v1_chr5_+_117583596_117583674	4.05774	HOX{A5,B5}.p2	AK155208|Taok3|330177|TAO kinase 3	NM_001081308|Taok3|330177|TAO kinase 3	AK171353|Taok3|330177|TAO kinase 3	AK037817|Taok3|330177|TAO kinase 3	AK042181|Taok3|330177|TAO kinase 3
mm9_v1_chr7_-_31699850_31699885	4.05536	HOX{A5,B5}.p2	M31811|Mag|17136|myelin-associated glycoprotein	NM_010758|Mag|17136|myelin-associated glycoprotein	AK003029|Mag|17136|myelin-associated glycoprotein
mm9_v1_chr2_+_121134843_121134847	4.0376	HOX{A5,B5}.p2	AK018185|Mtap1a|17754|microtubule-associated protein 1 A
mm9_v1_chr10_-_88145766_88145769	4.01094	HOX{A5,B5}.p2	AF098863|Spic|20728|Spi-C transcription factor (Spi-1/PU.1 related)	AK041260|Spic|20728|Spi-C transcription factor (Spi-1/PU.1 related)	AK137522|Spic|20728|Spi-C transcription factor (Spi-1/PU.1 related)	AK156024|Spic|20728|Spi-C transcription factor (Spi-1/PU.1 related)	AK156892|Spic|20728|Spi-C transcription factor (Spi-1/PU.1 related)	AK157188|Spic|20728|Spi-C transcription factor (Spi-1/PU.1 related)	NM_011461|Spic|20728|Spi-C transcription factor (Spi-1/PU.1 related)
mm9_v1_chr4_-_43467398_43467503	3.99194	HOX{A5,B5}.p2	AF543213|Cd72|12517|CD72 antigen	S40777|Cd72|12517|CD72 antigen	J04170|Cd72|12517|CD72 antigen	BC003824|Cd72|12517|CD72 antigen	AK144191|Cd72|12517|CD72 antigen	NM_001110320|Cd72|12517|CD72 antigen	NM_001110321|Cd72|12517|CD72 antigen	NM_001110322|Cd72|12517|CD72 antigen	NM_007654|Cd72|12517|CD72 antigen	AK151094|Cd72|12517|CD72 antigen	AK134132|Cd72|12517|CD72 antigen
mm9_v1_chr18_-_55149819_55149833	3.92147	HOX{A5,B5}.p2	AK051334|Zfp608|269023|zinc finger protein 608	NM_175751|Zfp608|269023|zinc finger protein 608
mm9_v1_chrX_-_61530170_61530177	3.8083	HOX{A5,B5}.p2	AK053065|Slitrk4|245446|SLIT and NTRK-like family, member 4	NM_178740|Slitrk4|245446|SLIT and NTRK-like family, member 4
mm9_v1_chrX_+_38754605_38754612	3.80155	HOX{A5,B5}.p2	BC076584|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm9_v1_chr15_-_27955680_27955732	3.77863	HOX{A5,B5}.p2	BC067059|Trio|223435|triple functional domain (PTPRF interacting)
mm9_v1_chrX_-_69901382_69901584	3.77673	HOX{A5,B5}.p2	BC119317|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	BC120686|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	M86568|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	AK134760|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	AK039144|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	NM_008067|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3
mm9_v1_chr8_-_88364846_88364855	3.69735	HOX{A5,B5}.p2	NM_028007|Itfg1|71927|integrin alpha FG-GAP repeat containing 1
mm9_v1_chr11_-_41995688_41995930	3.68577	HOX{A5,B5}.p2	X61430|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	AK039496|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	M86566|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm9_v1_chr11_-_99016390_99016390	3.68476	HOX{A5,B5}.p2	AK037965|Ccr7|12775|chemokine (C-C motif) receptor 7	AK154349|Ccr7|12775|chemokine (C-C motif) receptor 7	AK154736|Ccr7|12775|chemokine (C-C motif) receptor 7	AK154849|Ccr7|12775|chemokine (C-C motif) receptor 7	NM_007719|Ccr7|12775|chemokine (C-C motif) receptor 7
mm9_v1_chr7_+_52956589_52956640	3.61507	HOX{A5,B5}.p2	AF050105|Car11|12348|carbonic anhydrase 11
mm9_v1_chr16_-_95078278_95078296	3.59258	HOX{A5,B5}.p2	AB029502|Kcnj6|16522|potassium inwardly-rectifying channel, subfamily J, member 6	U51126|Kcnj6|16522|potassium inwardly-rectifying channel, subfamily J, member 6	AK015481|Kcnj6|16522|potassium inwardly-rectifying channel, subfamily J, member 6	NM_001025590|Kcnj6|16522|potassium inwardly-rectifying channel, subfamily J, member 6
mm9_v1_chr11_+_106612525_106612642	3.5861	HOX{A5,B5}.p2	BC139224|Gm885|380732|predicted gene 885	BC139225|Gm885|380732|predicted gene 885	BC145580|Gm885|380732|predicted gene 885	BC145582|Gm885|380732|predicted gene 885	AK169925|Gm885|380732|predicted gene 885	AB542953|Gm885|380732|predicted gene 885	AK136488|Gm885|380732|predicted gene 885	AK137500|Gm885|380732|predicted gene 885	AK171381|Gm885|380732|predicted gene 885	NM_001033435|Gm885|380732|predicted gene 885	AK151814|Gm885|380732|predicted gene 885	AK170947|Gm885|380732|predicted gene 885	AK153506|Gm885|380732|predicted gene 885
mm9_v1_chr2_-_153051118_153051176	3.56312	HOX{A5,B5}.p2	BC058340|Tspyl3|241732|TSPY-like 3	AK148882|Tspyl3|241732|TSPY-like 3	AK167722|Tspyl3|241732|TSPY-like 3	AK134522|Tspyl3|241732|TSPY-like 3	NM_198617|Tspyl3|241732|TSPY-like 3
mm9_v1_chr17_+_48403658_48403738	3.47648	HOX{A5,B5}.p2	AK156085|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	AK077228|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	NM_001033922|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	NM_001163795|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	NM_001163796|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	NM_172623|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	BC117091|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	BC137666|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	AY465530|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	AY465531|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	AY465532|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	DQ186654|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	DQ186655|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	AY557629|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	DQ087185|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	DQ087186|Treml4|224840|triggering receptor expressed on myeloid cells-like 4
mm9_v1_chr8_+_115093942_115094124	3.44202	HOX{A5,B5}.p2	BC034628|Cntnap4|170571|contactin associated protein-like 4	NM_130457|Cntnap4|170571|contactin associated protein-like 4	AK142816|Cntnap4|170571|contactin associated protein-like 4	AK081891|Cntnap4|170571|contactin associated protein-like 4	AK053611|Cntnap4|170571|contactin associated protein-like 4	AK042607|Cntnap4|170571|contactin associated protein-like 4	AK173255|Cntnap4|170571|contactin associated protein-like 4	AF333770|Cntnap4|170571|contactin associated protein-like 4
mm9_v1_chr2_+_158492854_158492905	3.41801	HOX{A5,B5}.p2	AK044453|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	NM_001159662|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	BC054764|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	BC057542|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	AF423761|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	AK042123|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B
mm9_v1_chr5_+_141200067_141200080	3.40635	HOX{A5,B5}.p2	AK139472|Amz1|231842|archaelysin family metallopeptidase 1	AK078332|Amz1|231842|archaelysin family metallopeptidase 1	NM_173405|Amz1|231842|archaelysin family metallopeptidase 1
mm9_v1_chr7_+_26412621_26412687	3.39387	HOX{A5,B5}.p2	NM_001036740|B3gnt8|232984|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8	NM_146184|B3gnt8|232984|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8	BC025206|B3gnt8|232984|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8	AK154220|B3gnt8|232984|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8	AK042388|B3gnt8|232984|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8	AK154901|B3gnt8|232984|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8
mm9_v1_chr3_-_123375305_123375392	3.35828	HOX{A5,B5}.p2	BC112404|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC079622|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	NM_031186|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	AF221095|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm9_v1_chrX_+_38754480_38754557	3.35002	HOX{A5,B5}.p2	NM_016886|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	BC086678|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm9_v1_chr11_+_3352465_3352485	3.33203	HOX{A5,B5}.p2	AK018450|8430429K09Rik|71523|RIKEN cDNA 8430429K09 gene	AK086952|8430429K09Rik|71523|RIKEN cDNA 8430429K09 gene
mm9_v1_chr6_-_134837738_134837876	3.31197	HOX{A5,B5}.p2	U46923|Gpr19|14760|G protein-coupled receptor 19	BC050187|Gpr19|14760|G protein-coupled receptor 19	NM_001167697|Gpr19|14760|G protein-coupled receptor 19	NM_001167699|Gpr19|14760|G protein-coupled receptor 19	NM_008157|Gpr19|14760|G protein-coupled receptor 19
mm9_v1_chrX_+_38754568_38754592	3.30467	HOX{A5,B5}.p2	AK138615|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm9_v1_chrX_-_141122722_141122821	3.28603	HOX{A5,B5}.p2	AF060107|Trpc5|22067|transient receptor potential cation channel, subfamily C, member 5	NM_009428|Trpc5|22067|transient receptor potential cation channel, subfamily C, member 5	AK021052|Trpc5|22067|transient receptor potential cation channel, subfamily C, member 5
mm9_v1_chr13_+_58909254_58909275	3.28479	HOX{A5,B5}.p2	AK147391|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr13_+_88961161_88961261	3.27284	HOX{A5,B5}.p2	AK045839|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK084810|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	BC056386|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK044978|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK084215|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK081003|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK045088|Edil3|13612|EGF-like repeats and discoidin I-like domains 3
mm9_v1_chr7_-_116226796_116226848	3.26949	HOX{A5,B5}.p2	AK053760|Ric3|320360|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK082275|Ric3|320360|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK134663|Ric3|320360|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK149334|Ric3|320360|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK038724|Ric3|320360|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK138641|Ric3|320360|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001038624|Ric3|320360|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_178780|Ric3|320360|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
mm9_v1_chr15_-_84277488_84277526	3.23733	HOX{A5,B5}.p2	BC119234|1810041L15Rik|72301|RIKEN cDNA 1810041L15 gene	BC120551|1810041L15Rik|72301|RIKEN cDNA 1810041L15 gene	BC062953|1810041L15Rik|72301|RIKEN cDNA 1810041L15 gene	NM_001163145|1810041L15Rik|72301|RIKEN cDNA 1810041L15 gene
mm9_v1_chr2_+_164793487_164793487	3.23728	HOX{A5,B5}.p2	AK147262|Slc12a5|57138|solute carrier family 12, member 5	NM_020333|Slc12a5|57138|solute carrier family 12, member 5
mm9_v1_chr6_-_18464792_18464824	3.22004	HOX{A5,B5}.p2	AK028980|Cttnbp2|30785|cortactin binding protein 2	AK019384|Cttnbp2|30785|cortactin binding protein 2	BC141407|Cttnbp2|30785|cortactin binding protein 2	NM_080285|Cttnbp2|30785|cortactin binding protein 2
mm9_v1_chr2_+_28496752_28496773	3.17663	HOX{A5,B5}.p2	AK030318|Tsc1|64930|tuberous sclerosis 1	AJ271912|Tsc1|64930|tuberous sclerosis 1	AK147428|Tsc1|64930|tuberous sclerosis 1	NM_022887|Tsc1|64930|tuberous sclerosis 1	AK083363|Tsc1|64930|tuberous sclerosis 1	AK078140|Tsc1|64930|tuberous sclerosis 1	AK154416|Tsc1|64930|tuberous sclerosis 1
mm9_v1_chr6_+_86388364_86388435	3.16492	HOX{A5,B5}.p2	AK047127|C87436|232196|expressed sequence C87436	NM_146170|C87436|232196|expressed sequence C87436	AK170524|C87436|232196|expressed sequence C87436	AK171511|C87436|232196|expressed sequence C87436	BC025632|C87436|232196|expressed sequence C87436
mm9_v1_chr5_-_118694869_118695124	3.14649	HOX{A5,B5}.p2	AK046850|Rnft2|269695|ring finger protein, transmembrane 2	NM_172998|Rnft2|269695|ring finger protein, transmembrane 2	BC057302|Rnft2|269695|ring finger protein, transmembrane 2	AK148930|Rnft2|269695|ring finger protein, transmembrane 2	NM_001109902|Rnft2|269695|ring finger protein, transmembrane 2	AK090256|Rnft2|269695|ring finger protein, transmembrane 2
mm9_v1_chr15_+_82105322_82105458	3.09793	HOX{A5,B5}.p2	AF104411|Sept3|24050|septin 3	NM_011889|Sept3|24050|septin 3	BC055738|Sept3|24050|septin 3
mm9_v1_chr17_+_7374435_7374635	3.06269	HOX{A5,B5}.p2	BC055331|Rps6ka2|20112|ribosomal protein S6 kinase, polypeptide 2	NM_011299|Rps6ka2|20112|ribosomal protein S6 kinase, polypeptide 2	AK044173|Rps6ka2|20112|ribosomal protein S6 kinase, polypeptide 2	BC043064|Rps6ka2|20112|ribosomal protein S6 kinase, polypeptide 2	BC056946|Rps6ka2|20112|ribosomal protein S6 kinase, polypeptide 2	BC051079|Rps6ka2|20112|ribosomal protein S6 kinase, polypeptide 2	AK019881|Rps6ka2|20112|ribosomal protein S6 kinase, polypeptide 2	AJ131021|Rps6ka2|20112|ribosomal protein S6 kinase, polypeptide 2
mm9_v1_chr15_+_89284449_89284497	3.06219	HOX{A5,B5}.p2	AK158968|Mapk8ip2|60597|mitogen-activated protein kinase 8 interacting protein 2
mm9_v1_chr8_+_26707480_26707573	3.05233	HOX{A5,B5}.p2	AK054186|D830025C05Rik|100042416|RIKEN cDNA D830025C05 gene	AK085892|D830025C05Rik|100042416|RIKEN cDNA D830025C05 gene
mm9_v1_chr10_-_61738537_61738571	3.02551	HOX{A5,B5}.p2	U89409|Hk1|15275|hexokinase 1	AK218898|Hk1|15275|hexokinase 1
mm9_v1_chr10_+_98453513_98453709	2.99553	HOX{A5,B5}.p2	AK053569|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	AK042547|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr7_-_28327749_28327874	2.99043	HOX{A5,B5}.p2	AK153508|Pld3|18807|phospholipase D family, member 3
mm9_v1_chrX_+_71002395_71002441	2.97739	HOX{A5,B5}.p2	AK138168|Plxnb3|140571|plexin B3	AK138631|Plxnb3|140571|plexin B3	AK140240|Plxnb3|140571|plexin B3	NM_019587|Plxnb3|140571|plexin B3
mm9_v1_chr2_-_181048957_181049005	2.9696	HOX{A5,B5}.p2	AK002957|Stmn3|20262|stathmin-like 3	AK003203|Stmn3|20262|stathmin-like 3	AF069708|Stmn3|20262|stathmin-like 3	BC057017|Stmn3|20262|stathmin-like 3	AB007912|Stmn3|20262|stathmin-like 3	AK082338|Stmn3|20262|stathmin-like 3
mm9_v1_chr11_-_119908236_119908480	2.94125	HOX{A5,B5}.p2	AY236858|Aatk|11302|apoptosis-associated tyrosine kinase	AY236859|Aatk|11302|apoptosis-associated tyrosine kinase	AB288871|Aatk|11302|apoptosis-associated tyrosine kinase	AB093253|Aatk|11302|apoptosis-associated tyrosine kinase	NM_001198785|Aatk|11302|apoptosis-associated tyrosine kinase	NM_007377|Aatk|11302|apoptosis-associated tyrosine kinase	BC042837|Aatk|11302|apoptosis-associated tyrosine kinase	BC052323|Aatk|11302|apoptosis-associated tyrosine kinase
mm9_v1_chr5_+_107832528_107832536	2.93448	HOX{A5,B5}.p2	NM_001001804|Ephx4|384214|epoxide hydrolase 4
mm9_v1_chr5_-_141476424_141476542	2.9123	HOX{A5,B5}.p2	AK002346|Card11|108723|caspase recruitment domain family, member 11	AY135367|Card11|108723|caspase recruitment domain family, member 11	BC096592|Card11|108723|caspase recruitment domain family, member 11
mm9_v1_chr5_+_138011078_138011117	2.86644	HOX{A5,B5}.p2	NM_015799|Trfr2|50765|transferrin receptor 2	AK004848|Trfr2|50765|transferrin receptor 2	AK004965|Trfr2|50765|transferrin receptor 2
mm9_v1_chr7_+_72789752_72789811	2.85185	HOX{A5,B5}.p2	AK044290|Tarsl2|272396|threonyl-tRNA synthetase-like 2	NM_172310|Tarsl2|272396|threonyl-tRNA synthetase-like 2	AK041280|Tarsl2|272396|threonyl-tRNA synthetase-like 2	BC039225|Tarsl2|272396|threonyl-tRNA synthetase-like 2	AK079416|Tarsl2|272396|threonyl-tRNA synthetase-like 2	AK040927|Tarsl2|272396|threonyl-tRNA synthetase-like 2
mm9_v1_chr17_+_57498108_57498162	2.83666	HOX{A5,B5}.p2	NM_010130|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	AK155862|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	AK151682|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	U66888|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	U66889|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	U66890|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	U66891|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	U66892|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	AK149898|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	X93328|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	AK133202|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	BC075688|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	AK151303|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1
mm9_v1_chr7_+_5008311_5008341	2.82403	HOX{A5,B5}.p2	NM_146178|Ccdc106|232821|coiled-coil domain containing 106	AB041804|Ccdc106|232821|coiled-coil domain containing 106
mm9_v1_chr18_-_16967100_16967238	2.75874	HOX{A5,B5}.p2	AB008811|Cdh2|12558|cadherin 2	M31131|Cdh2|12558|cadherin 2
mm9_v1_chr2_+_125073450_125073494	2.7548	HOX{A5,B5}.p2	AK152459|Dut|110074|deoxyuridine triphosphatase	AK011407|Dut|110074|deoxyuridine triphosphatase	AK003076|Dut|110074|deoxyuridine triphosphatase	BC053693|Dut|110074|deoxyuridine triphosphatase	AK153285|Dut|110074|deoxyuridine triphosphatase
mm9_v1_chr5_+_135499346_135499452	2.74094	HOX{A5,B5}.p2	BC100446|Stx1a|20907|syntaxin 1A (brain)	BC057892|Stx1a|20907|syntaxin 1A (brain)	D45208|Stx1a|20907|syntaxin 1A (brain)	NM_016801|Stx1a|20907|syntaxin 1A (brain)	BC047133|Stx1a|20907|syntaxin 1A (brain)
mm9_v1_chr4_-_133927533_133927693	2.72135	HOX{A5,B5}.p2	AK161915|Extl1|56219|exostoses (multiple)-like 1	AF224461|Extl1|56219|exostoses (multiple)-like 1	BC120890|Extl1|56219|exostoses (multiple)-like 1	BC120891|Extl1|56219|exostoses (multiple)-like 1
mm9_v1_chr18_-_16967557_16967557	2.7201	HOX{A5,B5}.p2	NM_007664|Cdh2|12558|cadherin 2
mm9_v1_chr2_+_164793796_164793824	2.68416	HOX{A5,B5}.p2	AF332063|Slc12a5|57138|solute carrier family 12, member 5	AF332064|Slc12a5|57138|solute carrier family 12, member 5	BC054808|Slc12a5|57138|solute carrier family 12, member 5
mm9_v1_chrX_-_47150892_47150921	2.67303	HOX{A5,B5}.p2	AK030452|Igsf1|209268|immunoglobulin superfamily, member 1	BC089474|Igsf1|209268|immunoglobulin superfamily, member 1	AY227771|Igsf1|209268|immunoglobulin superfamily, member 1	AY227772|Igsf1|209268|immunoglobulin superfamily, member 1	BC100420|Igsf1|209268|immunoglobulin superfamily, member 1	NM_177591|Igsf1|209268|immunoglobulin superfamily, member 1	NM_177915|Igsf1|209268|immunoglobulin superfamily, member 1
mm9_v1_chr7_+_52419289_52419313	2.6647	HOX{A5,B5}.p2	NM_182993|Slc17a7|72961|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7
mm9_v1_chr7_+_52419317_52419319	2.5932	HOX{A5,B5}.p2	AK159064|Slc17a7|72961|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7
mm9_v1_chr17_+_57244807_57244809	2.58185	HOX{A5,B5}.p2	AK155610|Tnfsf9|21950|tumor necrosis factor (ligand) superfamily, member 9	NM_009404|Tnfsf9|21950|tumor necrosis factor (ligand) superfamily, member 9
mm9_v1_chr2_+_49474775_49474833	2.56726	HOX{A5,B5}.p2	BC067051|Kif5c|16574|kinesin family member 5C	NM_008449|Kif5c|16574|kinesin family member 5C
mm9_v1_chr11_+_121098532_121098610	2.56631	HOX{A5,B5}.p2	NM_026272|Narf|67608|nuclear prelamin A recognition factor	AK076232|Narf|67608|nuclear prelamin A recognition factor	AK081305|Narf|67608|nuclear prelamin A recognition factor	AK013432|Narf|67608|nuclear prelamin A recognition factor	BC016090|Narf|67608|nuclear prelamin A recognition factor
mm9_v1_chrX_+_4446526_4446526	2.56489	HOX{A5,B5}.p2	NM_001099643|Gm3750|100042254|predicted gene 3750
mm9_v1_chr18_-_78320014_78320074	2.5416	HOX{A5,B5}.p2	AK012066|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	AJ420967|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	BC058594|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	BC100570|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	BC086673|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	AK153891|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1
mm9_v1_chr18_-_16967754_16967859	2.51973	HOX{A5,B5}.p2	AK146981|Cdh2|12558|cadherin 2
mm9_v1_chr5_+_111032523_111032540	2.51754	HOX{A5,B5}.p2	NM_001122639|Galnt9|231605|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9	AK170381|Galnt9|231605|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9	AK171529|Galnt9|231605|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9
mm9_v1_chrX_+_38754658_38754822	2.4586	HOX{A5,B5}.p2	AK161163|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AB022342|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	BC129855|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	BC129856|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AK220530|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AK135043|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AB079072|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AB102775|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AB102776|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AF483494|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AF483495|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AK046158|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm9_v1_chr8_-_88364760_88364825	2.44022	HOX{A5,B5}.p2	AK132242|Itfg1|71927|integrin alpha FG-GAP repeat containing 1	BC003977|Itfg1|71927|integrin alpha FG-GAP repeat containing 1	AK141948|Itfg1|71927|integrin alpha FG-GAP repeat containing 1
mm9_v1_chr2_-_129134865_129134894	2.42418	HOX{A5,B5}.p2	BC003727|Il1a|16175|interleukin 1 alpha
mm9_v1_chr7_-_134164627_134164726	2.42067	HOX{A5,B5}.p2	NM_001102563|Prrt2|69017|proline-rich transmembrane protein 2
mm9_v1_chr3_+_96400524_96400617	2.41687	HOX{A5,B5}.p2	NM_001024851|Ankrd34a|545554|ankyrin repeat domain 34A	BC052924|Ankrd34a|545554|ankyrin repeat domain 34A
mm9_v1_chr6_+_51494521_51494550	2.4137	HOX{A5,B5}.p2	AK028163|Snx10|71982|sorting nexin 10	NM_001127348|Snx10|71982|sorting nexin 10	NM_028035|Snx10|71982|sorting nexin 10	AK166121|Snx10|71982|sorting nexin 10
mm9_v1_chr8_+_14777772_14777775	2.41307	HOX{A5,B5}.p2	AK033077|Dlgap2|244310|discs, large (Drosophila) homolog-associated protein 2
mm9_v1_chr13_-_14155541_14155555	2.4107	HOX{A5,B5}.p2	AB016044|Ggps1|14593|geranylgeranyl diphosphate synthase 1
mm9_v1_chr14_+_55555300_55555355	2.40999	HOX{A5,B5}.p2	AK005168|Cmtm5|67272|CKLF-like MARVEL transmembrane domain containing 5	AK013666|Cmtm5|67272|CKLF-like MARVEL transmembrane domain containing 5	NM_026066|Cmtm5|67272|CKLF-like MARVEL transmembrane domain containing 5	AY241867|Cmtm5|67272|CKLF-like MARVEL transmembrane domain containing 5	BC049665|Cmtm5|67272|CKLF-like MARVEL transmembrane domain containing 5	DQ115983|Cmtm5|67272|CKLF-like MARVEL transmembrane domain containing 5	AK005375|Cmtm5|67272|CKLF-like MARVEL transmembrane domain containing 5
mm9_v1_chr15_+_99501148_99501237	2.39839	HOX{A5,B5}.p2	BC067025|Accn2|11419|amiloride-sensitive cation channel 2, neuronal	NM_009597|Accn2|11419|amiloride-sensitive cation channel 2, neuronal
mm9_v1_chrX_-_131745187_131745225	2.39532	HOX{A5,B5}.p2	AK005297|Tceal6|66104|transcription elongation factor A (SII)-like 6	BC087890|Tceal6|66104|transcription elongation factor A (SII)-like 6	NM_025355|Tceal6|66104|transcription elongation factor A (SII)-like 6
mm9_v1_chr3_+_105508375_105508375	2.3929	HOX{A5,B5}.p2	AK078368|6530418L21Rik|109050|RIKEN cDNA 6530418L21 gene	NM_001163356|6530418L21Rik|109050|RIKEN cDNA 6530418L21 gene
mm9_v1_chr15_+_78744328_78744471	2.39255	HOX{A5,B5}.p2	BC049107|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase	NM_020271|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase	AY366300|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase	AK043228|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase	BC046955|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase	AB041662|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase
mm9_v1_chrX_-_61530035_61530158	2.37877	HOX{A5,B5}.p2	BC117890|Slitrk4|245446|SLIT and NTRK-like family, member 4	BC117891|Slitrk4|245446|SLIT and NTRK-like family, member 4	AK046301|Slitrk4|245446|SLIT and NTRK-like family, member 4	AK039763|Slitrk4|245446|SLIT and NTRK-like family, member 4	AK032263|Slitrk4|245446|SLIT and NTRK-like family, member 4
mm9_v1_chrX_+_3748193_3748193	2.37858	HOX{A5,B5}.p2	NM_001099643|Gm3750|100042254|predicted gene 3750
mm9_v1_chr14_-_55735114_55735220	2.36536	HOX{A5,B5}.p2	AB099712|Jph4|319984|junctophilin 4	NM_177049|Jph4|319984|junctophilin 4
mm9_v1_chr11_-_79343891_79344047	2.35907	HOX{A5,B5}.p2	AK171332|Evi2a|14017|ecotropic viral integration site 2a	AK044098|Evi2a|14017|ecotropic viral integration site 2a	AK162958|Evi2a|14017|ecotropic viral integration site 2a	AK171594|Evi2a|14017|ecotropic viral integration site 2a	AK160302|Evi2a|14017|ecotropic viral integration site 2a	M34896|Evi2a|14017|ecotropic viral integration site 2a
mm9_v1_chr18_+_40418014_40418040	2.35501	HOX{A5,B5}.p2	NM_026135|Kctd16|383348|potassium channel tetramerisation domain containing 16	AK220381|Kctd16|383348|potassium channel tetramerisation domain containing 16
mm9_v1_chr4_-_141567551_141567551	2.3266	HOX{A5,B5}.p2	NM_177868|Fhad1|329977|forkhead-associated (FHA) phosphopeptide binding domain 1
mm9_v1_chr4_-_140616455_140616494	2.31593	HOX{A5,B5}.p2	NM_001145958|Crocc|230872|ciliary rootlet coiled-coil, rootletin
mm9_v1_chr19_-_11698132_11698208	2.29642	HOX{A5,B5}.p2	BC139323|Ms4a2|14126|membrane-spanning 4-domains, subfamily A, member 2	BC139324|Ms4a2|14126|membrane-spanning 4-domains, subfamily A, member 2	J05019|Ms4a2|14126|membrane-spanning 4-domains, subfamily A, member 2	NM_013516|Ms4a2|14126|membrane-spanning 4-domains, subfamily A, member 2	AK161121|Ms4a2|14126|membrane-spanning 4-domains, subfamily A, member 2	AK144021|Ms4a2|14126|membrane-spanning 4-domains, subfamily A, member 2
mm9_v1_chr2_+_92755251_92755331	2.29477	HOX{A5,B5}.p2	AK044038|Syt13|80976|synaptotagmin XIII	AK082425|Syt13|80976|synaptotagmin XIII	AK083803|Syt13|80976|synaptotagmin XIII	NM_030725|Syt13|80976|synaptotagmin XIII	BC030907|Syt13|80976|synaptotagmin XIII	AK049840|Syt13|80976|synaptotagmin XIII	AB048947|Syt13|80976|synaptotagmin XIII
mm9_v1_chr12_+_71008808_71008844	2.17595	HOX{A5,B5}.p2	AK140185|Atl1|73991|atlastin GTPase 1	AK046919|Atl1|73991|atlastin GTPase 1	BC050784|Atl1|73991|atlastin GTPase 1
mm9_v1_chr11_-_79344055_79344121	2.15511	HOX{A5,B5}.p2	AK046407|Evi2a|14017|ecotropic viral integration site 2a	BC038124|Evi2a|14017|ecotropic viral integration site 2a	AK170527|Evi2a|14017|ecotropic viral integration site 2a	AK005353|Evi2a|14017|ecotropic viral integration site 2a	NM_146023|Evi2b|216984|ecotropic viral integration site 2b	NM_001033711|Evi2a|14017|ecotropic viral integration site 2a	NM_010161|Evi2a|14017|ecotropic viral integration site 2a
mm9_v1_chr7_+_50692442_50692509	2.15453	HOX{A5,B5}.p2	BC055882|Nkg7|72310|natural killer cell group 7 sequence	AK088383|Nkg7|72310|natural killer cell group 7 sequence	NM_024253|Nkg7|72310|natural killer cell group 7 sequence	AK010872|Nkg7|72310|natural killer cell group 7 sequence
mm9_v1_chr1_-_173537404_173537546	2.10435	HOX{A5,B5}.p2	M84412|Ly9|17085|lymphocyte antigen 9	BC055380|Ly9|17085|lymphocyte antigen 9	BC066212|Ly9|17085|lymphocyte antigen 9	AB196804|Ly9|17085|lymphocyte antigen 9	AB196805|Ly9|17085|lymphocyte antigen 9	AB196806|Ly9|17085|lymphocyte antigen 9	AB196807|Ly9|17085|lymphocyte antigen 9	AK087345|Ly9|17085|lymphocyte antigen 9	BC095921|Ly9|17085|lymphocyte antigen 9	AK134106|Ly9|17085|lymphocyte antigen 9	AK150121|Ly9|17085|lymphocyte antigen 9	AK042288|Ly9|17085|lymphocyte antigen 9	AK088815|Ly9|17085|lymphocyte antigen 9	AK040306|Ly9|17085|lymphocyte antigen 9	NM_008534|Ly9|17085|lymphocyte antigen 9	AF244130|Ly9|17085|lymphocyte antigen 9	AF244131|Ly9|17085|lymphocyte antigen 9
mm9_v1_chr8_-_73982014_73982139	2.09561	HOX{A5,B5}.p2	AK185006|Abhd8|64296|abhydrolase domain containing 8	AK178673|Abhd8|64296|abhydrolase domain containing 8	AK179035|Abhd8|64296|abhydrolase domain containing 8	AK184390|Abhd8|64296|abhydrolase domain containing 8	AK187254|Abhd8|64296|abhydrolase domain containing 8	AK207815|Abhd8|64296|abhydrolase domain containing 8	AK209444|Abhd8|64296|abhydrolase domain containing 8	AK181691|Abhd8|64296|abhydrolase domain containing 8	AK185637|Abhd8|64296|abhydrolase domain containing 8	AK189463|Abhd8|64296|abhydrolase domain containing 8	AK181236|Abhd8|64296|abhydrolase domain containing 8
mm9_v1_chr7_-_52467149_52467149	2.09373	HOX{A5,B5}.p2	AF177399|Dkkl1|50722|dickkopf-like 1
mm9_v1_chr5_-_143084748_143084767	2.08354	HOX{A5,B5}.p2	AK132153|Mmd2|75104|monocyte to macrophage differentiation-associated 2
mm9_v1_chr4_+_88473179_88473319	2.0628	HOX{A5,B5}.p2	BC151087|Ifna6|15969|interferon alpha 6	NM_206871|Ifna6|15969|interferon alpha 6
mm9_v1_chr17_+_37210011_37210126	2.02238	HOX{A5,B5}.p2	AK013692|Gabbr1|54393|gamma-aminobutyric acid (GABA) B receptor, 1
mm9_v1_chr8_+_72426082_72426113	2.01745	HOX{A5,B5}.p2	BC049542|Tssk6|83984|testis-specific serine kinase 6	AF329484|Tssk6|83984|testis-specific serine kinase 6	NM_032004|Tssk6|83984|testis-specific serine kinase 6
mm9_v1_chr14_-_33998251_33998251	2.00939	HOX{A5,B5}.p2	NM_001146022|Wdfy4|545030|WD repeat and FYVE domain containing 4
mm9_v1_chr6_-_122806122_122806175	2.00473	HOX{A5,B5}.p2	AK154229|C3ar1|12267|complement component 3a receptor 1	NM_009779|C3ar1|12267|complement component 3a receptor 1	AK054017|C3ar1|12267|complement component 3a receptor 1
mm9_v1_chr6_+_124946723_124946772	1.98528	HOX{A5,B5}.p2	AK082984|C530028O21Rik|319352|RIKEN cDNA C530028O21 gene	NM_175696|C530028O21Rik|319352|RIKEN cDNA C530028O21 gene
mm9_v1_chr19_-_37250472_37250552	1.98434	HOX{A5,B5}.p2	AK147243|Cpeb3|208922|cytoplasmic polyadenylation element binding protein 3
mm9_v1_chr14_-_64606614_64606626	1.9767	HOX{A5,B5}.p2	AK005778|4930578I06Rik|67750|RIKEN cDNA 4930578I06 gene	BC048583|4930578I06Rik|67750|RIKEN cDNA 4930578I06 gene	NM_026359|4930578I06Rik|67750|RIKEN cDNA 4930578I06 gene	AK016302|4930578I06Rik|67750|RIKEN cDNA 4930578I06 gene
mm9_v1_chr6_+_57652448_57652452	1.94969	HOX{A5,B5}.p2	NM_133737|Lancl2|71835|LanC (bacterial lantibiotic synthetase component C)-like 2
mm9_v1_chr3_-_88964115_88964123	1.93929	HOX{A5,B5}.p2	AK082719|Hcn3|15168|hyperpolarization-activated, cyclic nucleotide-gated K+ 3
mm9_v1_chrX_-_30292985_30293030	1.92829	HOX{A5,B5}.p2	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	BC115962|Gm2933|100040732|predicted gene 2933	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001085545|Gm14345|630022|predicted gene 14345	NM_001085551|Gm14346|668958|predicted gene 14346	NM_001085552|Gm14351|668960|predicted gene 14351	NM_001085553|Gm10921|668963|predicted gene 10921
mm9_v1_chr7_+_108570211_108570212	1.91966	HOX{A5,B5}.p2	NM_001008548|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated	NM_001143848|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated
mm9_v1_chr13_-_31065909_31065982	1.91701	HOX{A5,B5}.p2	BC048154|Exoc2|66482|exocyst complex component 2	BC049102|Exoc2|66482|exocyst complex component 2	NM_025588|Exoc2|66482|exocyst complex component 2	AK050068|Exoc2|66482|exocyst complex component 2	AK032766|Exoc2|66482|exocyst complex component 2	AK042744|Exoc2|66482|exocyst complex component 2
mm9_v1_chr11_-_34597324_34597373	1.90518	HOX{A5,B5}.p2	AY027438|Dock2|94176|dedicator of cyto-kinesis 2	NM_033374|Dock2|94176|dedicator of cyto-kinesis 2
mm9_v1_chr2_-_3339919_3339919	1.86345	HOX{A5,B5}.p2	BC049538|Meig1|104362|meiosis expressed gene 1	NM_008579|Meig1|104362|meiosis expressed gene 1
mm9_v1_chr7_+_133924996_133925020	1.83092	HOX{A5,B5}.p2	BC140951|Tbx6|21389|T-box 6	NM_011538|Tbx6|21389|T-box 6	U57331|Tbx6|21389|T-box 6	AY654733|Tbx6|21389|T-box 6
mm9_v1_chr8_-_113605607_113605607	1.83044	HOX{A5,B5}.p2	NM_181549|Clec18a|353287|C-type lectin domain family 18, member A
mm9_v1_chr6_+_110595574_110595583	1.82682	HOX{A5,B5}.p2	AK053447|Grm7|108073|glutamate receptor, metabotropic 7	AK047160|Grm7|108073|glutamate receptor, metabotropic 7	AK047733|Grm7|108073|glutamate receptor, metabotropic 7
mm9_v1_chr2_-_44717141_44717141	1.81336	HOX{A5,B5}.p2	AK054272|Gtdc1|227835|glycosyltransferase-like domain containing 1	NM_172662|Gtdc1|227835|glycosyltransferase-like domain containing 1
mm9_v1_chr15_-_44946441_44946479	1.79868	HOX{A5,B5}.p2	AK038450|Kcnv1|67498|potassium channel, subfamily V, member 1	NM_026200|Kcnv1|67498|potassium channel, subfamily V, member 1
mm9_v1_chr6_+_96063137_96063148	1.79603	HOX{A5,B5}.p2	AK050001|Fam19a1|320265|family with sequence similarity 19, member A1	NM_182808|Fam19a1|320265|family with sequence similarity 19, member A1
mm9_v1_chr8_-_108224992_108225001	1.7826	HOX{A5,B5}.p2	NM_001012638|Acd|497652|adrenocortical dysplasia	AK170606|Acd|497652|adrenocortical dysplasia
mm9_v1_chr17_+_29272000_29272000	1.76136	HOX{A5,B5}.p2	AK036563|Rab44|442827|RAB44, member RAS oncogene family	NM_001002786|Rab44|442827|RAB44, member RAS oncogene family
mm9_v1_chr7_+_17460697_17460886	1.76072	HOX{A5,B5}.p2	AB073971|Dact3|629378|dapper homolog 3, antagonist of beta-catenin (xenopus)
mm9_v1_chr5_+_107760177_107760212	1.76038	HOX{A5,B5}.p2	AF358660|Brdt|114642|bromodomain, testis-specific	AK077137|Brdt|114642|bromodomain, testis-specific	NM_001079873|Brdt|114642|bromodomain, testis-specific	NM_054054|Brdt|114642|bromodomain, testis-specific
mm9_v1_chr16_+_17070249_17070422	1.75826	HOX{A5,B5}.p2	AK011452|Ypel1|106369|yippee-like 1 (Drosophila)	AK076063|Ypel1|106369|yippee-like 1 (Drosophila)	AK133401|Ypel1|106369|yippee-like 1 (Drosophila)	AF190624|Ypel1|106369|yippee-like 1 (Drosophila)	BC049737|Ypel1|106369|yippee-like 1 (Drosophila)	AK139453|Ypel1|106369|yippee-like 1 (Drosophila)	AK006137|Ypel1|106369|yippee-like 1 (Drosophila)	AK006858|Ypel1|106369|yippee-like 1 (Drosophila)	AK005955|Ypel1|106369|yippee-like 1 (Drosophila)	AK006049|Ypel1|106369|yippee-like 1 (Drosophila)	AK019819|Ypel1|106369|yippee-like 1 (Drosophila)	AK014931|Ypel1|106369|yippee-like 1 (Drosophila)	NM_023249|Ypel1|106369|yippee-like 1 (Drosophila)	AK018910|Ypel1|106369|yippee-like 1 (Drosophila)	AK006505|Ypel1|106369|yippee-like 1 (Drosophila)
mm9_v1_chr16_-_42340613_42340763	1.75463	HOX{A5,B5}.p2	AK031908|Gap43|14432|growth associated protein 43	BC080758|Gap43|14432|growth associated protein 43	BC028288|Gap43|14432|growth associated protein 43	NM_008083|Gap43|14432|growth associated protein 43
mm9_v1_chr17_+_34726750_34726889	1.75419	HOX{A5,B5}.p2	AK155617|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	NM_134116|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	AK146245|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	BC085186|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	AK144833|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	BC080804|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)
mm9_v1_chr2_-_112870487_112870487	1.74994	HOX{A5,B5}.p2	NM_177652|Ryr3|20192|ryanodine receptor 3
mm9_v1_chr18_-_60661144_60661295	1.74394	HOX{A5,B5}.p2	BC012898|2010002N04Rik|106878|RIKEN cDNA 2010002N04 gene	AF313412|2010002N04Rik|106878|RIKEN cDNA 2010002N04 gene	AK171923|2010002N04Rik|106878|RIKEN cDNA 2010002N04 gene	AK170783|2010002N04Rik|106878|RIKEN cDNA 2010002N04 gene	AK155873|2010002N04Rik|106878|RIKEN cDNA 2010002N04 gene	AK171810|2010002N04Rik|106878|RIKEN cDNA 2010002N04 gene
mm9_v1_chr4_-_133928435_133928461	1.73874	HOX{A5,B5}.p2	AK164184|Extl1|56219|exostoses (multiple)-like 1	AK085075|Extl1|56219|exostoses (multiple)-like 1	AK172619|Extl1|56219|exostoses (multiple)-like 1	NM_019578|Extl1|56219|exostoses (multiple)-like 1
mm9_v1_chr13_+_83663817_83664004	1.73841	HOX{A5,B5}.p2	AK036940|Mef2c|17260|myocyte enhancer factor 2C	AK077603|Mef2c|17260|myocyte enhancer factor 2C	AK172512|Mef2c|17260|myocyte enhancer factor 2C	AK172537|Mef2c|17260|myocyte enhancer factor 2C	AK047994|Mef2c|17260|myocyte enhancer factor 2C	AK043267|Mef2c|17260|myocyte enhancer factor 2C
mm9_v1_chr9_+_107302196_107302210	1.73093	HOX{A5,B5}.p2	BC056389|Cacna2d2|56808|calcium channel, voltage-dependent, alpha 2/delta subunit 2	NM_001174047|Cacna2d2|56808|calcium channel, voltage-dependent, alpha 2/delta subunit 2	NM_001174048|Cacna2d2|56808|calcium channel, voltage-dependent, alpha 2/delta subunit 2	NM_001174049|Cacna2d2|56808|calcium channel, voltage-dependent, alpha 2/delta subunit 2	NM_001174050|Cacna2d2|56808|calcium channel, voltage-dependent, alpha 2/delta subunit 2	NM_020263|Cacna2d2|56808|calcium channel, voltage-dependent, alpha 2/delta subunit 2
mm9_v1_chr2_-_120862405_120862570	1.72994	HOX{A5,B5}.p2	AK158219|Epb4.2|13828|erythrocyte protein band 4.2	AK158370|Epb4.2|13828|erythrocyte protein band 4.2	AK165288|Epb4.2|13828|erythrocyte protein band 4.2	AK172410|Epb4.2|13828|erythrocyte protein band 4.2	AK158247|Epb4.2|13828|erythrocyte protein band 4.2	BC053739|Epb4.2|13828|erythrocyte protein band 4.2	AK143841|Epb4.2|13828|erythrocyte protein band 4.2	L35933|Epb4.2|13828|erythrocyte protein band 4.2	BC066194|Epb4.2|13828|erythrocyte protein band 4.2	BC066806|Epb4.2|13828|erythrocyte protein band 4.2	NM_013513|Epb4.2|13828|erythrocyte protein band 4.2	U04055|Epb4.2|13828|erythrocyte protein band 4.2	AK133896|Epb4.2|13828|erythrocyte protein band 4.2	AK137484|Epb4.2|13828|erythrocyte protein band 4.2
mm9_v1_chr3_-_107320831_107320842	1.71617	HOX{A5,B5}.p2	AK083807|Slc6a17|229706|solute carrier family 6 (neurotransmitter transporter), member 17
mm9_v1_chr8_+_97605137_97605189	1.70692	HOX{A5,B5}.p2	AK010364|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK037858|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK034103|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK136322|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK031630|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK049345|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK087973|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	BC045200|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1
mm9_v1_chr17_-_32946797_32946863	1.70681	HOX{A5,B5}.p2	BC052046|Zfp811|240063|zinc finger protein 811	NM_183177|Zfp811|240063|zinc finger protein 811
mm9_v1_chr7_-_108112785_108112972	1.70402	HOX{A5,B5}.p2	AX775901|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	BC064095|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	BC027331|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	AK008436|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	AK008496|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	NM_183168|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	AK142680|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6
mm9_v1_chr17_+_5941279_5941541	1.67951	HOX{A5,B5}.p2	AF041857|Synj2|20975|synaptojanin 2	NM_001113352|Synj2|20975|synaptojanin 2	NM_001113353|Synj2|20975|synaptojanin 2	AK142919|Synj2|20975|synaptojanin 2	BC058749|Synj2|20975|synaptojanin 2	AK148053|Synj2|20975|synaptojanin 2
mm9_v1_chr3_+_136566015_136566156	1.66375	HOX{A5,B5}.p2	AK076570|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr10_+_73284612_73284690	1.66281	HOX{A5,B5}.p2	NM_001142735|Pcdh15|11994|protocadherin 15	NM_001142736|Pcdh15|11994|protocadherin 15	NM_001142737|Pcdh15|11994|protocadherin 15	NM_001142738|Pcdh15|11994|protocadherin 15	NM_001142739|Pcdh15|11994|protocadherin 15	NM_001142740|Pcdh15|11994|protocadherin 15	NM_001142741|Pcdh15|11994|protocadherin 15	NM_001142742|Pcdh15|11994|protocadherin 15	NM_001142743|Pcdh15|11994|protocadherin 15	NM_001142746|Pcdh15|11994|protocadherin 15	NM_001142747|Pcdh15|11994|protocadherin 15	NM_001142748|Pcdh15|11994|protocadherin 15	NM_001142760|Pcdh15|11994|protocadherin 15	NM_023115|Pcdh15|11994|protocadherin 15	AF281899|Pcdh15|11994|protocadherin 15	AY949849|Pcdh15|11994|protocadherin 15	DQ354396|Pcdh15|11994|protocadherin 15	DQ354397|Pcdh15|11994|protocadherin 15	DQ354398|Pcdh15|11994|protocadherin 15	DQ354399|Pcdh15|11994|protocadherin 15	DQ354400|Pcdh15|11994|protocadherin 15	DQ354401|Pcdh15|11994|protocadherin 15	DQ354402|Pcdh15|11994|protocadherin 15	DQ354403|Pcdh15|11994|protocadherin 15	DQ354404|Pcdh15|11994|protocadherin 15	DQ354405|Pcdh15|11994|protocadherin 15	DQ354406|Pcdh15|11994|protocadherin 15	DQ354407|Pcdh15|11994|protocadherin 15	DQ354408|Pcdh15|11994|protocadherin 15	DQ354409|Pcdh15|11994|protocadherin 15	DQ354410|Pcdh15|11994|protocadherin 15	DQ354411|Pcdh15|11994|protocadherin 15	DQ354412|Pcdh15|11994|protocadherin 15	DQ354413|Pcdh15|11994|protocadherin 15	DQ354414|Pcdh15|11994|protocadherin 15	DQ354415|Pcdh15|11994|protocadherin 15	AK139154|Pcdh15|11994|protocadherin 15	DQ354416|Pcdh15|11994|protocadherin 15	DQ354417|Pcdh15|11994|protocadherin 15	DQ354418|Pcdh15|11994|protocadherin 15
mm9_v1_chr2_-_28477437_28477507	1.6601	HOX{A5,B5}.p2	BC132365|Gfi1b|14582|growth factor independent 1B	BC132367|Gfi1b|14582|growth factor independent 1B	BC145238|Gfi1b|14582|growth factor independent 1B	AF017275|Gfi1b|14582|growth factor independent 1B	BC052654|Gfi1b|14582|growth factor independent 1B	NM_001160406|Gfi1b|14582|growth factor independent 1B	NM_008114|Gfi1b|14582|growth factor independent 1B	AK157262|Gfi1b|14582|growth factor independent 1B
mm9_v1_chr4_+_17780739_17780875	1.65904	HOX{A5,B5}.p2	AK053598|Mmp16|17389|matrix metallopeptidase 16	AK048543|Mmp16|17389|matrix metallopeptidase 16	AK046170|Mmp16|17389|matrix metallopeptidase 16	AB021228|Mmp16|17389|matrix metallopeptidase 16	AF282844|Mmp16|17389|matrix metallopeptidase 16
mm9_v1_chr19_+_8915018_8915039	1.64979	HOX{A5,B5}.p2	AK004634|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)	AK151606|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)	AK155753|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)	AK170183|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
mm9_v1_chr8_-_88214871_88214907	1.62983	HOX{A5,B5}.p2	AY138991|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2	BC068168|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2	NM_001081324|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2
mm9_v1_chrX_+_5246184_5246184	1.62942	HOX{A5,B5}.p2	NM_001085523|Gm14374|434725|predicted gene 14374
mm9_v1_chr11_-_69011310_69011344	1.62828	HOX{A5,B5}.p2	U93277|Alox8|11688|arachidonate 8-lipoxygenase	Y14696|Alox8|11688|arachidonate 8-lipoxygenase	AK028724|Alox8|11688|arachidonate 8-lipoxygenase	NM_009661|Alox8|11688|arachidonate 8-lipoxygenase	BC015253|Alox8|11688|arachidonate 8-lipoxygenase
mm9_v1_chr11_+_87394647_87394667	1.61216	HOX{A5,B5}.p2	AB078010|Sept4|18952|septin 4
mm9_v1_chr17_-_36423348_36423434	1.589	HOX{A5,B5}.p2	AY211078|H2-M10.2|333715|histocompatibility 2, M region locus 10.2	AF539598|H2-M10.2|333715|histocompatibility 2, M region locus 10.2	NM_177923|H2-M10.2|333715|histocompatibility 2, M region locus 10.2	BC137985|H2-M10.2|333715|histocompatibility 2, M region locus 10.2	BC137987|H2-M10.2|333715|histocompatibility 2, M region locus 10.2
mm9_v1_chr19_-_58868891_58868903	1.5639	HOX{A5,B5}.p2	BC049561|1700019N19Rik|67507|RIKEN cDNA 1700019N19 gene	AK006423|1700019N19Rik|67507|RIKEN cDNA 1700019N19 gene	AK006135|1700019N19Rik|67507|RIKEN cDNA 1700019N19 gene	NM_026208|1700019N19Rik|67507|RIKEN cDNA 1700019N19 gene
mm9_v1_chrX_-_31877468_31877468	1.55919	HOX{A5,B5}.p2	BC115962|Gm2933|100040732|predicted gene 2933	NM_001145038|Gm2933|100040732|predicted gene 2933
mm9_v1_chr5_-_73127743_73127840	1.55916	HOX{A5,B5}.p2	BC120552|Txk|22165|TXK tyrosine kinase	NM_013698|Txk|22165|TXK tyrosine kinase	BC137710|Txk|22165|TXK tyrosine kinase	D43963|Txk|22165|TXK tyrosine kinase
mm9_v1_chr11_+_4773977_4774007	1.54982	HOX{A5,B5}.p2	AK031804|Nipsnap1|18082|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)	AK013140|Nipsnap1|18082|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)	AK147786|Nipsnap1|18082|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)	AJ001260|Nipsnap1|18082|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)	NM_008698|Nipsnap1|18082|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)	BC010837|Nipsnap1|18082|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)
mm9_v1_chr9_+_59598963_59599005	1.54513	HOX{A5,B5}.p2	NM_173018|Myo9a|270163|myosin IXa	AK048681|Myo9a|270163|myosin IXa
mm9_v1_chr9_+_5298516_5298702	1.54049	HOX{A5,B5}.p2	BC008152|Casp1|12362|caspase 1	NM_009807|Casp1|12362|caspase 1	L28095|Casp1|12362|caspase 1	AK132826|Casp1|12362|caspase 1	AK163069|Casp1|12362|caspase 1
mm9_v1_chr18_-_43847367_43847426	1.53258	HOX{A5,B5}.p2	AK133750|Jakmip2|76217|janus kinase and microtubule interacting protein 2	NM_001163637|Jakmip2|76217|janus kinase and microtubule interacting protein 2
mm9_v1_chr9_-_49607164_49607185	1.53236	HOX{A5,B5}.p2	NM_001081445|Ncam1|17967|neural cell adhesion molecule 1	NM_001113204|Ncam1|17967|neural cell adhesion molecule 1	NM_010875|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr16_-_10447440_10447456	1.53161	HOX{A5,B5}.p2	BC068110|Fam18a|383103|family with sequence similarity 18, member A	NM_001013778|Fam18a|383103|family with sequence similarity 18, member A
mm9_v1_chrX_+_3410667_3410712	1.53064	HOX{A5,B5}.p2	NM_001085545|Gm14345|630022|predicted gene 14345	NM_001085551|Gm14346|668958|predicted gene 14346	NM_001085552|Gm14351|668960|predicted gene 14351	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like
mm9_v1_chr7_-_134351860_134352145	1.52729	HOX{A5,B5}.p2	AK047320|Tbc1d10b|68449|TBC1 domain family, member 10b	AK047327|Tbc1d10b|68449|TBC1 domain family, member 10b	NM_144522|Tbc1d10b|68449|TBC1 domain family, member 10b
mm9_v1_chr15_-_44946248_44946315	1.52309	HOX{A5,B5}.p2	AK076120|Kcnv1|67498|potassium channel, subfamily V, member 1	AK012275|Kcnv1|67498|potassium channel, subfamily V, member 1	AK139482|Kcnv1|67498|potassium channel, subfamily V, member 1
mm9_v1_chr8_-_125566133_125566242	1.50736	HOX{A5,B5}.p2	AK138711|Ankrd11|77087|ankyrin repeat domain 11
mm9_v1_chr7_-_54389053_54389053	1.50159	HOX{A5,B5}.p2	NM_013643|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5	U28217|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5
mm9_v1_chr12_-_80081732_80081802	1.47728	HOX{A5,B5}.p2	BC079613|Tmem229b|268567|transmembrane protein 229B	AK036593|Tmem229b|268567|transmembrane protein 229B	AK169759|Tmem229b|268567|transmembrane protein 229B	AK151405|Tmem229b|268567|transmembrane protein 229B	AK149922|Tmem229b|268567|transmembrane protein 229B
mm9_v1_chrX_-_3463274_3463319	1.46451	HOX{A5,B5}.p2	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	BC115962|Gm2933|100040732|predicted gene 2933	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001085545|Gm14345|630022|predicted gene 14345	NM_001085551|Gm14346|668958|predicted gene 14346	NM_001085552|Gm14351|668960|predicted gene 14351
mm9_v1_chrX_+_4074963_4074963	1.46315	HOX{A5,B5}.p2	NM_001085553|Gm10921|668963|predicted gene 10921
mm9_v1_chr17_+_36005333_36005386	1.45762	HOX{A5,B5}.p2	AK154854|2310014H01Rik|76448|RIKEN cDNA 2310014H01 gene
mm9_v1_chr4_+_154256366_154256404	1.45025	HOX{A5,B5}.p2	AK154366|Mmel1|27390|membrane metallo-endopeptidase-like 1
mm9_v1_chrX_+_30245481_30245481	1.44625	HOX{A5,B5}.p2	NM_001085553|Gm10921|668963|predicted gene 10921
mm9_v1_chr14_-_70689267_70689330	1.44029	HOX{A5,B5}.p2	AK133393|Ppp3cc|19057|protein phosphatase 3, catalytic subunit, gamma isoform
mm9_v1_chr14_-_88871202_88871202	1.43176	HOX{A5,B5}.p2	AK083114|Pcdh20|219257|protocadherin 20	NM_178685|Pcdh20|219257|protocadherin 20
mm9_v1_chr8_+_128822478_128822500	1.42961	HOX{A5,B5}.p2	NM_175434|Slc35f3|210027|solute carrier family 35, member F3	AK046359|Slc35f3|210027|solute carrier family 35, member F3
mm9_v1_chr5_+_27588462_27588514	1.42551	HOX{A5,B5}.p2	NM_001136060|Dpp6|13483|dipeptidylpeptidase 6	AK031903|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chrX_-_92853721_92853847	1.42127	HOX{A5,B5}.p2	AK129302|Zc4h2|245522|zinc finger, C4H2 domain containing	AK162005|Zc4h2|245522|zinc finger, C4H2 domain containing	AK086554|Zc4h2|245522|zinc finger, C4H2 domain containing	BC050850|Zc4h2|245522|zinc finger, C4H2 domain containing	BC119285|Zc4h2|245522|zinc finger, C4H2 domain containing	BC119311|Zc4h2|245522|zinc finger, C4H2 domain containing	BC079862|Zc4h2|245522|zinc finger, C4H2 domain containing	NM_001003916|Zc4h2|245522|zinc finger, C4H2 domain containing	AK155445|Zc4h2|245522|zinc finger, C4H2 domain containing
mm9_v1_chr10_-_101953046_101953066	1.41334	HOX{A5,B5}.p2	AF304160|Nts|67405|neurotensin	BC043024|Nts|67405|neurotensin	NM_024435|Nts|67405|neurotensin	AK017202|Nts|67405|neurotensin	AK017212|Nts|67405|neurotensin
mm9_v1_chr5_-_138404150_138404333	1.40247	HOX{A5,B5}.p2	AK034037|Gjc3|118446|gap junction protein, gamma 3	BC125305|Gjc3|118446|gap junction protein, gamma 3	AK047368|Gjc3|118446|gap junction protein, gamma 3	NM_080450|Gjc3|118446|gap junction protein, gamma 3	AK045577|Gjc3|118446|gap junction protein, gamma 3	AK147913|Gjc3|118446|gap junction protein, gamma 3
mm9_v1_chr15_+_83610434_83610456	1.39893	HOX{A5,B5}.p2	AK048421|Mpped1|223726|metallophosphoesterase domain containing 1	NM_172610|Mpped1|223726|metallophosphoesterase domain containing 1
mm9_v1_chrX_-_3243543_3243628	1.38563	HOX{A5,B5}.p2	NM_001099643|Gm3750|100042254|predicted gene 3750	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	BC115962|Gm2933|100040732|predicted gene 2933	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001085545|Gm14345|630022|predicted gene 14345	NM_001085551|Gm14346|668958|predicted gene 14346	NM_001085552|Gm14351|668960|predicted gene 14351
mm9_v1_chr18_+_74019038_74019047	1.38099	HOX{A5,B5}.p2	AY243876|Mro|71263|maestro	NM_027741|Mro|71263|maestro	AK015725|Mro|71263|maestro
mm9_v1_chrX_-_31752420_31752465	1.37925	HOX{A5,B5}.p2	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	BC115962|Gm2933|100040732|predicted gene 2933	NM_001145038|Gm2933|100040732|predicted gene 2933	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001085552|Gm14351|668960|predicted gene 14351
mm9_v1_chr7_-_134093094_134093095	1.3792	HOX{A5,B5}.p2	BC111101|Asphd1|233879|aspartate beta-hydroxylase domain containing 1	NM_001039645|Asphd1|233879|aspartate beta-hydroxylase domain containing 1	AK043553|Asphd1|233879|aspartate beta-hydroxylase domain containing 1
mm9_v1_chr11_+_60955985_60956002	1.37817	HOX{A5,B5}.p2	AK155178|Tnfrsf13b|57916|tumor necrosis factor receptor superfamily, member 13b
mm9_v1_chrX_-_20508584_20508688	1.3748	HOX{A5,B5}.p2	AK152782|Cfp|18636|complement factor properdin	AK159609|Cfp|18636|complement factor properdin	AK159853|Cfp|18636|complement factor properdin	AK150212|Cfp|18636|complement factor properdin	AK171374|Cfp|18636|complement factor properdin	BC132369|Cfp|18636|complement factor properdin	BC138306|Cfp|18636|complement factor properdin	AK154306|Cfp|18636|complement factor properdin	AK159291|Cfp|18636|complement factor properdin	NM_008823|Cfp|18636|complement factor properdin
mm9_v1_chrX_+_3907010_3907055	1.37324	HOX{A5,B5}.p2	NM_001085543|Gm14347|627264|predicted gene 14347	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like
mm9_v1_chr19_+_6400566_6400582	1.35807	HOX{A5,B5}.p2	AF081193|Rasgrp2|19395|RAS, guanyl releasing protein 2	U78171|Rasgrp2|19395|RAS, guanyl releasing protein 2	NM_011242|Rasgrp2|19395|RAS, guanyl releasing protein 2
mm9_v1_chr4_+_17780628_17780643	1.3563	HOX{A5,B5}.p2	BC057926|Mmp16|17389|matrix metallopeptidase 16	NM_019724|Mmp16|17389|matrix metallopeptidase 16
mm9_v1_chr6_+_128312987_128313011	1.34545	HOX{A5,B5}.p2	BC075723|Foxm1|14235|forkhead box M1	BC065067|Foxm1|14235|forkhead box M1	NM_008021|Foxm1|14235|forkhead box M1
mm9_v1_chrX_+_30598310_30598355	1.34326	HOX{A5,B5}.p2	NM_001168334|Gm2799|100040482|predicted gene 2799	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like
mm9_v1_chrX_+_17722982_17722995	1.34022	HOX{A5,B5}.p2	AK007061|Dusp21|73547|dual specificity phosphatase 21	BC048605|Dusp21|73547|dual specificity phosphatase 21	NM_028568|Dusp21|73547|dual specificity phosphatase 21
mm9_v1_chrX_-_3995572_3995572	1.33498	HOX{A5,B5}.p2	NM_001085554|Gm10922|668964|predicted gene 10922
mm9_v1_chrX_+_159339512_159339556	1.32613	HOX{A5,B5}.p2	NM_001168569|Ctps2|55936|cytidine 5'-triphosphate synthase 2	NM_001168571|Ctps2|55936|cytidine 5'-triphosphate synthase 2	NM_018737|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK052854|Ctps2|55936|cytidine 5'-triphosphate synthase 2
mm9_v1_chr18_+_77424738_77424806	1.31733	HOX{A5,B5}.p2	X98014|St8sia5|225742|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5	AK078670|St8sia5|225742|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5	AK162549|St8sia5|225742|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
mm9_v1_chrX_+_30732633_30732678	1.31221	HOX{A5,B5}.p2	NM_001168334|Gm2799|100040482|predicted gene 2799	NM_027955|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like
mm9_v1_chr5_+_138011057_138011067	1.30999	HOX{A5,B5}.p2	AK155526|Trfr2|50765|transferrin receptor 2
mm9_v1_chrX_-_3667391_3667436	1.30808	HOX{A5,B5}.p2	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001085551|Gm14346|668958|predicted gene 14346	NM_001085552|Gm14351|668960|predicted gene 14351
mm9_v1_chr4_-_154663787_154663878	1.30301	HOX{A5,B5}.p2	BC057694|Prkcz|18762|protein kinase C, zeta
mm9_v1_chr2_-_94104877_94104914	1.29583	HOX{A5,B5}.p2	AK140370|E530001K10Rik|414123|RIKEN cDNA E530001K10 gene	AK089118|E530001K10Rik|414123|RIKEN cDNA E530001K10 gene
mm9_v1_chr2_+_71819264_71819343	1.28317	HOX{A5,B5}.p2	AK220281|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AB021132|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AK161934|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AK017479|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AF115480|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	BC139822|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	NM_019688|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr13_+_23787679_23787706	1.27222	HOX{A5,B5}.p2	NM_010377|Hist1h1t|107970|histone cluster 1, H1t	BC119305|Hist1h1t|107970|histone cluster 1, H1t	BC119307|Hist1h1t|107970|histone cluster 1, H1t
mm9_v1_chr10_-_70055559_70055571	1.26892	HOX{A5,B5}.p2	NM_001162846|Phyhipl|70911|phytanoyl-CoA hydroxylase interacting protein-like	AK014946|Phyhipl|70911|phytanoyl-CoA hydroxylase interacting protein-like
mm9_v1_chr17_-_27702625_27702715	1.2683	HOX{A5,B5}.p2	BC028464|AI413582|106672|expressed sequence AI413582	AK131681|AI413582|106672|expressed sequence AI413582	AK131593|AI413582|106672|expressed sequence AI413582	NM_001002895|AI413582|106672|expressed sequence AI413582
mm9_v1_chr6_-_113145321_113145377	1.26682	HOX{A5,B5}.p2	AK220449|Lhfpl4|269788|lipoma HMGIC fusion partner-like protein 4	BC085130|Lhfpl4|269788|lipoma HMGIC fusion partner-like protein 4	AK046437|Lhfpl4|269788|lipoma HMGIC fusion partner-like protein 4	NM_177763|Lhfpl4|269788|lipoma HMGIC fusion partner-like protein 4
mm9_v1_chr13_+_58909236_58909250	1.26121	HOX{A5,B5}.p2	AK028827|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chrX_-_31350951_31350996	1.26078	HOX{A5,B5}.p2	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001099333|Gm2863|100040606|predicted gene 2863
mm9_v1_chr11_+_30854457_30854463	1.2602	HOX{A5,B5}.p2	AK010315|Asb3|65257|ankyrin repeat and SOCS box-containing 3	BC023086|Asb3|65257|ankyrin repeat and SOCS box-containing 3
mm9_v1_chr7_-_52467196_52467252	1.25104	HOX{A5,B5}.p2	AK131694|Dkkl1|50722|dickkopf-like 1	AF274312|Dkkl1|50722|dickkopf-like 1	BC002215|Dkkl1|50722|dickkopf-like 1	NM_015789|Dkkl1|50722|dickkopf-like 1
mm9_v1_chr7_-_25084361_25084383	1.24746	HOX{A5,B5}.p2	AK149960|Zfp61|22719|zinc finger protein 61	AK148158|Zfp61|22719|zinc finger protein 61
mm9_v1_chr15_-_82054741_82054798	1.24384	HOX{A5,B5}.p2	DQ294928|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	DQ294929|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	BC104126|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	BC104127|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	AK008142|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	NM_028075|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	AK156387|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	AF350257|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	AF373847|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	AK172406|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c
mm9_v1_chr3_+_68494565_68494565	1.24293	HOX{A5,B5}.p2	NM_001159424|Il12a|16159|interleukin 12a
mm9_v1_chr1_-_167638124_167638145	1.23359	HOX{A5,B5}.p2	BC025872|Rcsd1|226594|RCSD domain containing 1	AK171914|Rcsd1|226594|RCSD domain containing 1
mm9_v1_chrX_+_30977792_30977837	1.23277	HOX{A5,B5}.p2	NM_001168337|Gm2825|100040533|predicted gene 2825	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like
mm9_v1_chr1_+_42752608_42752622	1.2303	HOX{A5,B5}.p2	
mm9_v1_chr13_-_24083033_24083082	1.22361	HOX{A5,B5}.p2	AK148468|Scgn|214189|secretagogin, EF-hand calcium binding protein	BC016093|Scgn|214189|secretagogin, EF-hand calcium binding protein	NM_145399|Scgn|214189|secretagogin, EF-hand calcium binding protein
mm9_v1_chr10_+_62706550_62706579	1.21802	HOX{A5,B5}.p2	AK019546|Herc4|67345|hect domain and RLD 4
mm9_v1_chr18_+_61287513_61287576	1.21387	HOX{A5,B5}.p2	AK155498|Csf1r|12978|colony stimulating factor 1 receptor
mm9_v1_chr7_-_25509308_25509308	1.21264	HOX{A5,B5}.p2	BC037749|Gm4763|210155|predicted gene 4763	NM_177593|Gm4763|210155|predicted gene 4763
mm9_v1_chr11_+_87394609_87394632	1.20929	HOX{A5,B5}.p2	NM_011129|Sept4|18952|septin 4	X61452|Sept4|18952|septin 4
mm9_v1_chr3_-_102586596_102586636	1.19732	HOX{A5,B5}.p2	M35719|Tshb|22094|thyroid stimulating hormone, beta subunit	M35720|Tshb|22094|thyroid stimulating hormone, beta subunit	M35721|Tshb|22094|thyroid stimulating hormone, beta subunit	M35723|Tshb|22094|thyroid stimulating hormone, beta subunit	NM_001165939|Tshb|22094|thyroid stimulating hormone, beta subunit	NM_001165940|Tshb|22094|thyroid stimulating hormone, beta subunit	NM_009432|Tshb|22094|thyroid stimulating hormone, beta subunit
mm9_v1_chr11_-_99283568_99283572	1.19732	HOX{A5,B5}.p2	BC131911|Krt12|268482|keratin 12	AK143182|Krt12|268482|keratin 12	U02880|Krt12|268482|keratin 12	AK053362|Krt12|268482|keratin 12	NM_010661|Krt12|268482|keratin 12
mm9_v1_chr2_+_19120744_19120744	1.19625	HOX{A5,B5}.p2	NM_001081083|Armc3|70882|armadillo repeat containing 3
mm9_v1_chr7_+_50663608_50663649	1.18987	HOX{A5,B5}.p2	AK156766|Siglecg|243958|sialic acid binding Ig-like lectin G	AK036698|Siglecg|243958|sialic acid binding Ig-like lectin G	BC114981|Siglecg|243958|sialic acid binding Ig-like lectin G	AK042488|Siglecg|243958|sialic acid binding Ig-like lectin G	NM_172900|Siglecg|243958|sialic acid binding Ig-like lectin G
mm9_v1_chr2_+_125073192_125073264	1.18649	HOX{A5,B5}.p2	AK077244|Dut|110074|deoxyuridine triphosphatase	NM_023595|Dut|110074|deoxyuridine triphosphatase
mm9_v1_chr13_-_14155631_14155710	1.17843	HOX{A5,B5}.p2	BC006798|Ggps1|14593|geranylgeranyl diphosphate synthase 1	AK132907|Ggps1|14593|geranylgeranyl diphosphate synthase 1	BC069913|Ggps1|14593|geranylgeranyl diphosphate synthase 1	NM_010282|Ggps1|14593|geranylgeranyl diphosphate synthase 1	AK007605|Ggps1|14593|geranylgeranyl diphosphate synthase 1	AK089026|Ggps1|14593|geranylgeranyl diphosphate synthase 1	AK011980|Ggps1|14593|geranylgeranyl diphosphate synthase 1
mm9_v1_chr9_-_112119764_112119854	1.17121	HOX{A5,B5}.p2	AK137974|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177617|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK050613|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177623|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21
mm9_v1_chr2_+_31951030_31951062	1.16792	HOX{A5,B5}.p2	AK134638|Ppapdc3|227721|phosphatidic acid phosphatase type 2 domain containing 3
mm9_v1_chr7_+_4874478_4874551	1.16111	HOX{A5,B5}.p2	AK163549|Nat14|269854|N-acetyltransferase 14
mm9_v1_chr7_+_150190950_150190964	1.14429	HOX{A5,B5}.p2	AY039000|Tspan32|27027|tetraspanin 32	NM_001128080|Tspan32|27027|tetraspanin 32	AK041748|Tspan32|27027|tetraspanin 32
mm9_v1_chr18_-_60661636_60661640	1.14301	HOX{A5,B5}.p2	NM_134133|2010002N04Rik|106878|RIKEN cDNA 2010002N04 gene	AK143383|2010002N04Rik|106878|RIKEN cDNA 2010002N04 gene
mm9_v1_chr11_-_6505567_6505609	1.14257	HOX{A5,B5}.p2	AB182283|Nacad|192950|NAC alpha domain containing	AK046108|Nacad|192950|NAC alpha domain containing
mm9_v1_chr4_+_126431013_126431096	1.14245	HOX{A5,B5}.p2	NM_001035526|AU040320|100317|expressed sequence AU040320	NM_133886|AU040320|100317|expressed sequence AU040320	BC028869|AU040320|100317|expressed sequence AU040320	AK163033|AU040320|100317|expressed sequence AU040320	AK170261|AU040320|100317|expressed sequence AU040320	AK043006|AU040320|100317|expressed sequence AU040320	AK007704|AU040320|100317|expressed sequence AU040320	AK031342|AU040320|100317|expressed sequence AU040320
mm9_v1_chr9_-_75446888_75446974	1.12557	HOX{A5,B5}.p2	AK076562|Tmod2|50876|tropomodulin 2	AK015263|Tmod2|50876|tropomodulin 2	AK017072|Tmod2|50876|tropomodulin 2	BC052227|Tmod2|50876|tropomodulin 2	NM_001038710|Tmod2|50876|tropomodulin 2	AK015719|Tmod2|50876|tropomodulin 2
mm9_v1_chr8_-_108224931_108224989	1.11752	HOX{A5,B5}.p2	AK171345|Acd|497652|adrenocortical dysplasia	AK160599|Acd|497652|adrenocortical dysplasia	BC138694|Acd|497652|adrenocortical dysplasia	BC138695|Acd|497652|adrenocortical dysplasia	BC145384|Acd|497652|adrenocortical dysplasia	AK032683|Acd|497652|adrenocortical dysplasia	AK145959|Acd|497652|adrenocortical dysplasia	AK171458|Acd|497652|adrenocortical dysplasia	AK052768|Acd|497652|adrenocortical dysplasia
mm9_v1_chr9_+_70390659_70390695	1.11641	HOX{A5,B5}.p2	AK017715|Sltm|66660|SAFB-like, transcription modulator	AF462146|Sltm|66660|SAFB-like, transcription modulator	NM_025690|Sltm|66660|SAFB-like, transcription modulator	BC139202|Sltm|66660|SAFB-like, transcription modulator	BC145577|Sltm|66660|SAFB-like, transcription modulator
mm9_v1_chr8_+_122668828_122668828	1.11215	HOX{A5,B5}.p2	BC027126|6430548M08Rik|234797|RIKEN cDNA 6430548M08 gene	NM_001163760|6430548M08Rik|234797|RIKEN cDNA 6430548M08 gene
mm9_v1_chr14_-_64162810_64162839	1.10679	HOX{A5,B5}.p2	AK044957|Mtmr9|210376|myotubularin related protein 9
mm9_v1_chr6_-_93863547_93863683	1.09501	HOX{A5,B5}.p2	AK163800|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001083321|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	BC060273|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001083320|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr15_-_84686558_84686558	1.09107	HOX{A5,B5}.p2	AK046530|Phf21b|271305|PHD finger protein 21B	NM_001081166|Phf21b|271305|PHD finger protein 21B
mm9_v1_chr9_-_49607017_49607038	1.08923	HOX{A5,B5}.p2	AK011804|Ncam1|17967|neural cell adhesion molecule 1	AK011905|Ncam1|17967|neural cell adhesion molecule 1	AK082621|Ncam1|17967|neural cell adhesion molecule 1	AK051197|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr6_+_83115900_83115968	1.08878	HOX{A5,B5}.p2	NM_001198866|Dctn1|13191|dynactin 1	NM_001198867|Dctn1|13191|dynactin 1	AK171376|Dctn1|13191|dynactin 1	BC066061|Dctn1|13191|dynactin 1	AK172261|Dctn1|13191|dynactin 1
mm9_v1_chrX_+_159339561_159339801	1.0869	HOX{A5,B5}.p2	AK084595|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK085381|Ctps2|55936|cytidine 5'-triphosphate synthase 2	BC003257|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK150966|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK151597|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK164206|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK032018|Ctps2|55936|cytidine 5'-triphosphate synthase 2
mm9_v1_chrX_+_104451216_104451366	1.07721	HOX{A5,B5}.p2	AK171832|Gpr174|213439|G protein-coupled receptor 174	NM_001177781|Gpr174|213439|G protein-coupled receptor 174	AK156069|Gpr174|213439|G protein-coupled receptor 174	AK153611|Gpr174|213439|G protein-coupled receptor 174	NM_001033251|Gpr174|213439|G protein-coupled receptor 174
mm9_v1_chr15_+_74346624_74346672	1.0716	HOX{A5,B5}.p2	AK147607|Bai1|107831|brain-specific angiogenesis inhibitor 1	NM_174991|Bai1|107831|brain-specific angiogenesis inhibitor 1	AK147456|Bai1|107831|brain-specific angiogenesis inhibitor 1	AK147459|Bai1|107831|brain-specific angiogenesis inhibitor 1
mm9_v1_chr15_+_74346853_74346867	1.0715	HOX{A5,B5}.p2	AK147600|Bai1|107831|brain-specific angiogenesis inhibitor 1
mm9_v1_chr9_-_63225646_63225720	1.06919	HOX{A5,B5}.p2	BC013697|Map2k5|23938|mitogen-activated protein kinase kinase 5	AB019374|Map2k5|23938|mitogen-activated protein kinase kinase 5	NM_011840|Map2k5|23938|mitogen-activated protein kinase kinase 5	AK020716|Map2k5|23938|mitogen-activated protein kinase kinase 5	AK159261|Map2k5|23938|mitogen-activated protein kinase kinase 5	AK166137|Map2k5|23938|mitogen-activated protein kinase kinase 5
mm9_v1_chr17_+_25033425_25033488	1.05348	HOX{A5,B5}.p2	AK007399|Nme3|79059|non-metastatic cells 3, protein expressed in	NM_019730|Nme3|79059|non-metastatic cells 3, protein expressed in	AF153449|Nme3|79059|non-metastatic cells 3, protein expressed in	AF288689|Nme3|79059|non-metastatic cells 3, protein expressed in	BC028503|Nme3|79059|non-metastatic cells 3, protein expressed in	AK002525|Nme3|79059|non-metastatic cells 3, protein expressed in
mm9_v1_chr7_+_4874178_4874216	1.04778	HOX{A5,B5}.p2	AK078272|Nat14|269854|N-acetyltransferase 14	BC047219|Nat14|269854|N-acetyltransferase 14
mm9_v1_chr4_-_42541768_42541768	1.03983	HOX{A5,B5}.p2	NM_001085530|Gm13298|545611|predicted gene 13298
mm9_v1_chr14_-_45839064_45839076	1.03827	HOX{A5,B5}.p2	AK039945|Txndc16|70561|thioredoxin domain containing 16	AK046466|Txndc16|70561|thioredoxin domain containing 16	NM_172597|Txndc16|70561|thioredoxin domain containing 16	BC060101|Txndc16|70561|thioredoxin domain containing 16	AK164111|Txndc16|70561|thioredoxin domain containing 16
mm9_v1_chr14_-_64162744_64162804	1.03192	HOX{A5,B5}.p2	BC046275|Mtmr9|210376|myotubularin related protein 9	NM_177594|Mtmr9|210376|myotubularin related protein 9	AK035026|Mtmr9|210376|myotubularin related protein 9
mm9_v1_chr6_+_72078331_72078339	1.02734	HOX{A5,B5}.p2	AB013302|St3gal5|20454|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
mm9_v1_chr17_+_30763879_30763935	1.02319	HOX{A5,B5}.p2	AK161258|Dnahc8|13417|dynein, axonemal, heavy chain 8	AF356520|Dnahc8|13417|dynein, axonemal, heavy chain 8	AF356521|Dnahc8|13417|dynein, axonemal, heavy chain 8	NM_013811|Dnahc8|13417|dynein, axonemal, heavy chain 8	AF356522|Dnahc8|13417|dynein, axonemal, heavy chain 8	AF356523|Dnahc8|13417|dynein, axonemal, heavy chain 8	AF363577|Dnahc8|13417|dynein, axonemal, heavy chain 8
mm9_v1_chr3_-_88229007_88229060	1.02242	HOX{A5,B5}.p2	BC052771|Slc25a44|229517|solute carrier family 25, member 44	AK166331|Slc25a44|229517|solute carrier family 25, member 44	AK169886|Slc25a44|229517|solute carrier family 25, member 44	AK044648|Slc25a44|229517|solute carrier family 25, member 44	AK046586|Slc25a44|229517|solute carrier family 25, member 44	AK079532|Slc25a44|229517|solute carrier family 25, member 44	AK165159|Slc25a44|229517|solute carrier family 25, member 44	AK083470|Slc25a44|229517|solute carrier family 25, member 44	AK083273|Slc25a44|229517|solute carrier family 25, member 44	AK144731|Slc25a44|229517|solute carrier family 25, member 44	AK166011|Slc25a44|229517|solute carrier family 25, member 44	AK168955|Slc25a44|229517|solute carrier family 25, member 44	AK032960|Slc25a44|229517|solute carrier family 25, member 44	AK134914|Slc25a44|229517|solute carrier family 25, member 44	NM_001145876|Slc25a44|229517|solute carrier family 25, member 44	NM_001145877|Slc25a44|229517|solute carrier family 25, member 44	NM_178696|Slc25a44|229517|solute carrier family 25, member 44
mm9_v1_chr9_+_70390523_70390626	1.0163	HOX{A5,B5}.p2	AK077578|Sltm|66660|SAFB-like, transcription modulator	NM_026337|Sltm|66660|SAFB-like, transcription modulator	AK078251|Sltm|66660|SAFB-like, transcription modulator	AK011815|Sltm|66660|SAFB-like, transcription modulator
mm9_v1_chr6_-_124790292_124790292	1.01385	HOX{A5,B5}.p2	BC018239|Gnb3|14695|guanine nucleotide binding protein (G protein), beta 3	NM_013530|Gnb3|14695|guanine nucleotide binding protein (G protein), beta 3
mm9_v1_chr10_-_105278374_105278437	1.00823	HOX{A5,B5}.p2	BC067068|BC067068|216292|cDNA sequence BC067068	AK144620|BC067068|216292|cDNA sequence BC067068	AK148535|BC067068|216292|cDNA sequence BC067068	NM_207522|BC067068|216292|cDNA sequence BC067068
mm9_v1_chr3_+_127493568_127493590	1.00612	HOX{A5,B5}.p2	AK149408|Tifa|211550|TRAF-interacting protein with forkhead-associated domain
mm9_v1_chr6_+_67966702_67966735	1.00517	HOX{A5,B5}.p2	
mm9_v1_chr18_+_24148132_24148185	0.997628	HOX{A5,B5}.p2	AK132703|Zfp35|22694|zinc finger protein 35	NM_011755|Zfp35|22694|zinc finger protein 35	AK159080|Zfp35|22694|zinc finger protein 35	X17617|Zfp35|22694|zinc finger protein 35
mm9_v1_chr5_+_3803163_3803177	0.996749	HOX{A5,B5}.p2	NM_001170552|Krit1|79264|KRIT1, ankyrin repeat containing	NM_030675|Krit1|79264|KRIT1, ankyrin repeat containing
mm9_v1_chr2_-_148701203_148701269	0.990204	HOX{A5,B5}.p2	AK002438|Cst3|13010|cystatin C	NM_009976|Cst3|13010|cystatin C	AK014368|Cst3|13010|cystatin C	AK131728|Cst3|13010|cystatin C	AK146333|Cst3|13010|cystatin C
mm9_v1_chr8_+_19495096_19495096	0.976252	HOX{A5,B5}.p2	AJ298147|Defb7|246080|defensin beta 7	NM_139220|Defb7|246080|defensin beta 7
mm9_v1_chr1_-_196918418_196918441	0.967584	HOX{A5,B5}.p2	AB001566|Cd46|17221|CD46 antigen, complement regulatory protein	AB022600|Cd46|17221|CD46 antigen, complement regulatory protein	AB010919|Cd46|17221|CD46 antigen, complement regulatory protein	AK006632|Cd46|17221|CD46 antigen, complement regulatory protein	BC150660|Cd46|17221|CD46 antigen, complement regulatory protein	NM_010778|Cd46|17221|CD46 antigen, complement regulatory protein
mm9_v1_chr13_-_67370003_67370074	0.965583	HOX{A5,B5}.p2	BC062958|Zfp458|238690|zinc finger protein 458	NM_001001152|Zfp458|238690|zinc finger protein 458
mm9_v1_chr5_+_138187390_138187596	0.954196	HOX{A5,B5}.p2	AK143608|Tsc22d4|78829|TSC22 domain family, member 4	AK079510|Tsc22d4|78829|TSC22 domain family, member 4	AF201286|Tsc22d4|78829|TSC22 domain family, member 4	AK201891|Tsc22d4|78829|TSC22 domain family, member 4	AK154490|Tsc22d4|78829|TSC22 domain family, member 4
mm9_v1_chr14_+_32973077_32973184	0.951717	HOX{A5,B5}.p2	NM_001033988|Ncoa4|27057|nuclear receptor coactivator 4	AK129020|Ncoa4|27057|nuclear receptor coactivator 4	AK145070|Ncoa4|27057|nuclear receptor coactivator 4	AK145954|Ncoa4|27057|nuclear receptor coactivator 4	AK145945|Ncoa4|27057|nuclear receptor coactivator 4	AK147125|Ncoa4|27057|nuclear receptor coactivator 4	AK146498|Ncoa4|27057|nuclear receptor coactivator 4	AK146598|Ncoa4|27057|nuclear receptor coactivator 4	BC031528|Ncoa4|27057|nuclear receptor coactivator 4	AK143965|Ncoa4|27057|nuclear receptor coactivator 4	AK146646|Ncoa4|27057|nuclear receptor coactivator 4	BC085086|Ncoa4|27057|nuclear receptor coactivator 4
mm9_v1_chr18_-_61867246_61867319	0.948744	HOX{A5,B5}.p2	BC060677|Pcyox1l|240334|prenylcysteine oxidase 1 like	AK050006|Pcyox1l|240334|prenylcysteine oxidase 1 like	NM_172832|Pcyox1l|240334|prenylcysteine oxidase 1 like
mm9_v1_chr18_-_38158371_38158561	0.946142	HOX{A5,B5}.p2	AK036638|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	AF469622|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
mm9_v1_chr11_+_79404517_79404662	0.935893	HOX{A5,B5}.p2	AK147344|Rab11fip4|268451|RAB11 family interacting protein 4 (class II)	AK147219|Rab11fip4|268451|RAB11 family interacting protein 4 (class II)
mm9_v1_chr11_+_121296252_121296285	0.933162	HOX{A5,B5}.p2	NM_001038699|Fn3k|63828|fructosamine 3 kinase	NM_022014|Fn3k|63828|fructosamine 3 kinase	AK010151|Fn3k|63828|fructosamine 3 kinase	BC064710|Fn3k|63828|fructosamine 3 kinase	AJ404616|Fn3k|63828|fructosamine 3 kinase	AK030362|Fn3k|63828|fructosamine 3 kinase	AK172235|Fn3k|63828|fructosamine 3 kinase	BC054374|Fn3k|63828|fructosamine 3 kinase
mm9_v1_chr11_-_115939274_115939274	0.931147	HOX{A5,B5}.p2	BC046519|Unc13d|70450|unc-13 homolog D (C. elegans)	NM_001009573|Unc13d|70450|unc-13 homolog D (C. elegans)
mm9_v1_chr3_+_87161790_87161896	0.930539	HOX{A5,B5}.p2	AK159181|Cd5l|11801|CD5 antigen-like	NM_009690|Cd5l|11801|CD5 antigen-like	AK159823|Cd5l|11801|CD5 antigen-like	BC094459|Cd5l|11801|CD5 antigen-like	AK159132|Cd5l|11801|CD5 antigen-like	BC006799|Cd5l|11801|CD5 antigen-like	AF018268|Cd5l|11801|CD5 antigen-like	AF018269|Cd5l|11801|CD5 antigen-like	AF011428|Cd5l|11801|CD5 antigen-like
mm9_v1_chr5_-_69732915_69732947	0.928964	HOX{A5,B5}.p2	AK039167|Kctd8|243043|potassium channel tetramerisation domain containing 8	AK043351|Kctd8|243043|potassium channel tetramerisation domain containing 8	AK047519|Kctd8|243043|potassium channel tetramerisation domain containing 8	AY615967|Kctd8|243043|potassium channel tetramerisation domain containing 8	NM_175519|Kctd8|243043|potassium channel tetramerisation domain containing 8
mm9_v1_chr10_+_77441365_77441428	0.926441	HOX{A5,B5}.p2	AK003097|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	AK004032|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	NM_026431|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	BC016605|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	AK075794|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	BC029982|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	AK165293|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	AK153233|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	BC010330|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	AK147511|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene
mm9_v1_chr8_-_23916037_23916141	0.924602	HOX{A5,B5}.p2	BC030484|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	BC027301|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK017991|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK134634|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK082988|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK080668|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK081220|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AY039763|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK077365|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	NM_001122820|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	NM_029505|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit
mm9_v1_chr10_-_112363848_112364044	0.917933	HOX{A5,B5}.p2	AK078766|Atxn7l3b|382423|ataxin 7-like 3B	AK051537|Atxn7l3b|382423|ataxin 7-like 3B
mm9_v1_chr2_+_125072955_125073018	0.905862	HOX{A5,B5}.p2	AK135438|Dut|110074|deoxyuridine triphosphatase	NM_001159646|Dut|110074|deoxyuridine triphosphatase	AK017216|Dut|110074|deoxyuridine triphosphatase	BC019979|Dut|110074|deoxyuridine triphosphatase
mm9_v1_chr10_+_22026504_22026530	0.904638	HOX{A5,B5}.p2	AK040102|C920009B18Rik|606736|RIKEN cDNA C920009B18 gene	AK166154|C920009B18Rik|606736|RIKEN cDNA C920009B18 gene	AK147974|C920009B18Rik|606736|RIKEN cDNA C920009B18 gene	AK166039|C920009B18Rik|606736|RIKEN cDNA C920009B18 gene	AK170137|H60a|15101|histocompatibility 60a
mm9_v1_chr5_+_3803180_3803451	0.902487	HOX{A5,B5}.p2	AK088956|Krit1|79264|KRIT1, ankyrin repeat containing	AK008150|Krit1|79264|KRIT1, ankyrin repeat containing	AK082175|Krit1|79264|KRIT1, ankyrin repeat containing	AK085107|Krit1|79264|KRIT1, ankyrin repeat containing	AK144667|Krit1|79264|KRIT1, ankyrin repeat containing	AK172215|Krit1|79264|KRIT1, ankyrin repeat containing	AF310134|Krit1|79264|KRIT1, ankyrin repeat containing	BC054819|Krit1|79264|KRIT1, ankyrin repeat containing	AK039264|Krit1|79264|KRIT1, ankyrin repeat containing	BC016087|Krit1|79264|KRIT1, ankyrin repeat containing	BC141042|Krit1|79264|KRIT1, ankyrin repeat containing	BC085252|Krit1|79264|KRIT1, ankyrin repeat containing	AF306509|Krit1|79264|KRIT1, ankyrin repeat containing
mm9_v1_chr8_+_41837561_41837564	0.90231	HOX{A5,B5}.p2	AF167403|Adam25|23793|a disintegrin and metallopeptidase domain 25 (testase 2)	NM_011781|Adam25|23793|a disintegrin and metallopeptidase domain 25 (testase 2)	AK016581|Adam25|23793|a disintegrin and metallopeptidase domain 25 (testase 2)
mm9_v1_chr6_+_57652594_57652646	0.894566	HOX{A5,B5}.p2	BC016072|Lancl2|71835|LanC (bacterial lantibiotic synthetase component C)-like 2	AB035967|Lancl2|71835|LanC (bacterial lantibiotic synthetase component C)-like 2
mm9_v1_chr15_-_103140868_103140877	0.893813	HOX{A5,B5}.p2	AF272948|Gpr84|80910|G protein-coupled receptor 84	NM_030720|Gpr84|80910|G protein-coupled receptor 84	BC023249|Gpr84|80910|G protein-coupled receptor 84
mm9_v1_chr18_+_24148190_24148219	0.889369	HOX{A5,B5}.p2	BC138830|Zfp35|22694|zinc finger protein 35	BC138832|Zfp35|22694|zinc finger protein 35
mm9_v1_chr17_-_85489544_85489623	0.887987	HOX{A5,B5}.p2	AK083070|Prepl|213760|prolyl endopeptidase-like	BC004612|Prepl|213760|prolyl endopeptidase-like	AK028877|Prepl|213760|prolyl endopeptidase-like	AK163108|Prepl|213760|prolyl endopeptidase-like	AK020557|Prepl|213760|prolyl endopeptidase-like	AK050878|Prepl|213760|prolyl endopeptidase-like	NM_001163622|Prepl|213760|prolyl endopeptidase-like	NM_001163623|Prepl|213760|prolyl endopeptidase-like	NM_145984|Prepl|213760|prolyl endopeptidase-like	NM_001163624|Prepl|213760|prolyl endopeptidase-like
mm9_v1_chr17_-_37706393_37706395	0.886604	HOX{A5,B5}.p2	AK029968|Olfr112|258096|olfactory receptor 112	NM_001013575|Olfr112|258096|olfactory receptor 112	AK016338|Olfr112|258096|olfactory receptor 112
mm9_v1_chr17_+_32822572_32822626	0.885512	HOX{A5,B5}.p2	AF233645|Cyp4f15|106648|cytochrome P450, family 4, subfamily f, polypeptide 15	NM_134127|Cyp4f15|106648|cytochrome P450, family 4, subfamily f, polypeptide 15	BC021377|Cyp4f15|106648|cytochrome P450, family 4, subfamily f, polypeptide 15
mm9_v1_chr5_+_13791618_13791631	0.877446	HOX{A5,B5}.p2	NM_027650|Speer3|71026|spermatogenesis associated glutamate (E)-rich protein 3	AK016676|Speer3|71026|spermatogenesis associated glutamate (E)-rich protein 3
mm9_v1_chr3_+_19408594_19408651	0.877094	HOX{A5,B5}.p2	NM_001163536|Dnajc5b|66326|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	NM_025489|Dnajc5b|66326|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AK005725|Dnajc5b|66326|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AK005749|Dnajc5b|66326|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	BC049579|Dnajc5b|66326|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
mm9_v1_chrX_-_70905384_70905478	0.876907	HOX{A5,B5}.p2	BC055891|Pnck|93843|pregnancy upregulated non-ubiquitously expressed CaM kinase	BC051996|Pnck|93843|pregnancy upregulated non-ubiquitously expressed CaM kinase	AK158755|Pnck|93843|pregnancy upregulated non-ubiquitously expressed CaM kinase
mm9_v1_chr7_-_31827099_31827340	0.875572	HOX{A5,B5}.p2	BC031112|Fxyd5|18301|FXYD domain-containing ion transport regulator 5	BC013340|Fxyd5|18301|FXYD domain-containing ion transport regulator 5	AK169966|Fxyd5|18301|FXYD domain-containing ion transport regulator 5	AK003068|Fxyd5|18301|FXYD domain-containing ion transport regulator 5	AK170810|Fxyd5|18301|FXYD domain-containing ion transport regulator 5	U72680|Fxyd5|18301|FXYD domain-containing ion transport regulator 5	NM_008761|Fxyd5|18301|FXYD domain-containing ion transport regulator 5
mm9_v1_chrX_-_35605544_35605615	0.861462	HOX{A5,B5}.p2	BC062956|Fam70a|245386|family with sequence similarity 70, member A	AK077178|Fam70a|245386|family with sequence similarity 70, member A	AK078264|Fam70a|245386|family with sequence similarity 70, member A	AK041985|Fam70a|245386|family with sequence similarity 70, member A	AK045375|Fam70a|245386|family with sequence similarity 70, member A
mm9_v1_chr4_-_141346551_141346594	0.857746	HOX{A5,B5}.p2	AK051048|Dnajc16|214063|DnaJ (Hsp40) homolog, subfamily C, member 16	NM_172338|Dnajc16|214063|DnaJ (Hsp40) homolog, subfamily C, member 16	AK028692|Dnajc16|214063|DnaJ (Hsp40) homolog, subfamily C, member 16	AK164023|Dnajc16|214063|DnaJ (Hsp40) homolog, subfamily C, member 16	AK154946|Dnajc16|214063|DnaJ (Hsp40) homolog, subfamily C, member 16
mm9_v1_chr2_-_80287218_80287228	0.852749	HOX{A5,B5}.p2	AK019093|Frzb|20378|frizzled-related protein
mm9_v1_chr11_+_30854418_30854447	0.844102	HOX{A5,B5}.p2	AK038086|Asb3|65257|ankyrin repeat and SOCS box-containing 3	AK038897|Asb3|65257|ankyrin repeat and SOCS box-containing 3
mm9_v1_chrX_+_159339465_159339507	0.842192	HOX{A5,B5}.p2	NM_001168568|Ctps2|55936|cytidine 5'-triphosphate synthase 2
mm9_v1_chr8_-_73223897_73223993	0.834036	HOX{A5,B5}.p2	AK135112|Gm11175|100303737|predicted gene 11175
mm9_v1_chr7_+_25292375_25292405	0.826688	HOX{A5,B5}.p2	AK139174|Zfp428|232969|zinc finger protein 428
mm9_v1_chr1_-_167638156_167638224	0.821782	HOX{A5,B5}.p2	AK158429|Rcsd1|226594|RCSD domain containing 1	AK133961|Rcsd1|226594|RCSD domain containing 1	AK168816|Rcsd1|226594|RCSD domain containing 1	AK171323|Rcsd1|226594|RCSD domain containing 1	NM_001038846|Rcsd1|226594|RCSD domain containing 1	NM_178593|Rcsd1|226594|RCSD domain containing 1
mm9_v1_chr2_-_121097017_121097133	0.805768	HOX{A5,B5}.p2	AK045851|Trp53bp1|27223|transformation related protein 53 binding protein 1	BC079906|Trp53bp1|27223|transformation related protein 53 binding protein 1	AK045077|Trp53bp1|27223|transformation related protein 53 binding protein 1	AK148123|Trp53bp1|27223|transformation related protein 53 binding protein 1	BC037378|Trp53bp1|27223|transformation related protein 53 binding protein 1	NM_013735|Trp53bp1|27223|transformation related protein 53 binding protein 1
mm9_v1_chr9_-_107980133_107980133	0.802172	HOX{A5,B5}.p2	AY744153|Rnf123|84585|ring finger protein 123	NM_032543|Rnf123|84585|ring finger protein 123
mm9_v1_chr9_+_77899730_77899780	0.799176	HOX{A5,B5}.p2	D88612|Gcm1|14531|glial cells missing homolog 1 (Drosophila)	U59876|Gcm1|14531|glial cells missing homolog 1 (Drosophila)	BC066866|Gcm1|14531|glial cells missing homolog 1 (Drosophila)	NM_008103|Gcm1|14531|glial cells missing homolog 1 (Drosophila)	AK142574|Gcm1|14531|glial cells missing homolog 1 (Drosophila)
mm9_v1_chr2_+_180718936_180719214	0.795884	HOX{A5,B5}.p2	AK033807|9230112E08Rik|320800|RIKEN cDNA 9230112E08 gene	BC057100|9230112E08Rik|320800|RIKEN cDNA 9230112E08 gene	AK030308|9230112E08Rik|320800|RIKEN cDNA 9230112E08 gene
mm9_v1_chr19_-_44266763_44266931	0.788863	HOX{A5,B5}.p2	AB290927|Pkd2l1|329064|polycystic kidney disease 2-like 1	BC116297|Pkd2l1|329064|polycystic kidney disease 2-like 1	BC116323|Pkd2l1|329064|polycystic kidney disease 2-like 1	AF271381|Pkd2l1|329064|polycystic kidney disease 2-like 1	AK046772|Pkd2l1|329064|polycystic kidney disease 2-like 1	NM_181422|Pkd2l1|329064|polycystic kidney disease 2-like 1
mm9_v1_chr2_+_143858837_143858837	0.788275	HOX{A5,B5}.p2	AK076863|Banf2|403171|barrier to autointegration factor 2	BC049628|Banf2|403171|barrier to autointegration factor 2	NM_001044750|Banf2|403171|barrier to autointegration factor 2	NM_207275|Banf2|403171|barrier to autointegration factor 2
mm9_v1_chr2_-_148701164_148701201	0.783227	HOX{A5,B5}.p2	AK161856|Cst3|13010|cystatin C	AK151160|Cst3|13010|cystatin C	AK013676|Cst3|13010|cystatin C	AK153533|Cst3|13010|cystatin C	AK166430|Cst3|13010|cystatin C
mm9_v1_chrX_+_117040804_117040804	0.780423	HOX{A5,B5}.p2	AK050551|Pabpc5|93728|poly(A) binding protein, cytoplasmic 5	NM_053114|Pabpc5|93728|poly(A) binding protein, cytoplasmic 5
mm9_v1_chr7_-_87532756_87532844	0.772248	HOX{A5,B5}.p2	BC100306|Fes|14159|feline sarcoma oncogene	AK170418|Fes|14159|feline sarcoma oncogene	AK143639|Fes|14159|feline sarcoma oncogene	AK004587|Fes|14159|feline sarcoma oncogene	AK155861|Fes|14159|feline sarcoma oncogene	NM_010194|Fes|14159|feline sarcoma oncogene	BC038130|Fes|14159|feline sarcoma oncogene
mm9_v1_chr5_-_69732792_69732803	0.768521	HOX{A5,B5}.p2	AK042569|Kctd8|243043|potassium channel tetramerisation domain containing 8	AK045439|Kctd8|243043|potassium channel tetramerisation domain containing 8	AK082563|Kctd8|243043|potassium channel tetramerisation domain containing 8
mm9_v1_chr1_+_132916420_132916446	0.763153	HOX{A5,B5}.p2	AK152344|Il10|16153|interleukin 10	NM_010548|Il10|16153|interleukin 10	M37897|Il10|16153|interleukin 10	BC120612|Il10|16153|interleukin 10	BC137844|Il10|16153|interleukin 10
mm9_v1_chr8_+_125856612_125856612	0.762465	HOX{A5,B5}.p2	BC049152|Spire2|234857|spire homolog 2 (Drosophila)	BC054072|Spire2|234857|spire homolog 2 (Drosophila)	NM_172287|Spire2|234857|spire homolog 2 (Drosophila)
mm9_v1_chr4_+_59048027_59048124	0.759837	HOX{A5,B5}.p2	NM_025277|Gng10|14700|guanine nucleotide binding protein (G protein), gamma 10	AK014158|Gng10|14700|guanine nucleotide binding protein (G protein), gamma 10	BC023670|Gng10|14700|guanine nucleotide binding protein (G protein), gamma 10	AK003187|Gng10|14700|guanine nucleotide binding protein (G protein), gamma 10	BC055434|Gng10|14700|guanine nucleotide binding protein (G protein), gamma 10	BC061090|Gng10|14700|guanine nucleotide binding protein (G protein), gamma 10
mm9_v1_chr17_+_29797537_29797684	0.75727	HOX{A5,B5}.p2	AK080379|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	NM_028791|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK049190|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK154773|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK042060|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK043733|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK088624|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK150392|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK151194|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK152276|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK152799|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK153021|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK153066|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	BC024691|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK005044|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK152452|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK198101|Ftsjd2|74157|FtsJ methyltransferase domain containing 2
mm9_v1_chr12_+_33063653_33063723	0.755424	HOX{A5,B5}.p2	NM_001162903|2010109K11Rik|72123|RIKEN cDNA 2010109K11 gene
mm9_v1_chr2_-_148701108_148701112	0.754259	HOX{A5,B5}.p2	AF311741|Cst3|13010|cystatin C	AF483486|Cst3|13010|cystatin C	AF483487|Cst3|13010|cystatin C
mm9_v1_chr4_-_11892848_11892892	0.751282	HOX{A5,B5}.p2	BC048372|Pdp1|381511|pyruvate dehyrogenase phosphatase catalytic subunit 1	NM_001098231|Pdp1|381511|pyruvate dehyrogenase phosphatase catalytic subunit 1
mm9_v1_chr8_-_125565896_125565896	0.750477	HOX{A5,B5}.p2	NM_001081379|Ankrd11|77087|ankyrin repeat domain 11
mm9_v1_chr7_+_51136529_51136569	0.743562	HOX{A5,B5}.p2	AK087426|Klk4|56640|kallikrein related-peptidase 4 (prostase, enamel matrix, prostate)	AF019979|Klk4|56640|kallikrein related-peptidase 4 (prostase, enamel matrix, prostate)	NM_019928|Klk4|56640|kallikrein related-peptidase 4 (prostase, enamel matrix, prostate)	BC100716|Klk4|56640|kallikrein related-peptidase 4 (prostase, enamel matrix, prostate)	BC100717|Klk4|56640|kallikrein related-peptidase 4 (prostase, enamel matrix, prostate)	BC100718|Klk4|56640|kallikrein related-peptidase 4 (prostase, enamel matrix, prostate)	BC100719|Klk4|56640|kallikrein related-peptidase 4 (prostase, enamel matrix, prostate)
mm9_v1_chr11_-_83392129_83392139	0.7416	HOX{A5,B5}.p2	NM_011338|Ccl9|20308|chemokine (C-C motif) ligand 9
mm9_v1_chr8_-_26707934_26708016	0.730412	HOX{A5,B5}.p2	AK076546|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	BC055685|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	NM_173012|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK041725|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK031563|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK034050|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK050943|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK163507|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2
mm9_v1_chr17_+_34727032_34727160	0.725894	HOX{A5,B5}.p2	AK155863|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	BC021942|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)
mm9_v1_chrX_-_131543723_131543772	0.724358	HOX{A5,B5}.p2	BC067022|Zmat1|215693|zinc finger, matrin type 1	NM_175446|Zmat1|215693|zinc finger, matrin type 1
mm9_v1_chr10_+_22026565_22026590	0.721918	HOX{A5,B5}.p2	AK083313|C920009B18Rik|606736|RIKEN cDNA C920009B18 gene	AK083339|C920009B18Rik|606736|RIKEN cDNA C920009B18 gene	AK171185|C920009B18Rik|606736|RIKEN cDNA C920009B18 gene
mm9_v1_chr11_+_74433092_74433113	0.71994	HOX{A5,B5}.p2	AK143211|E130309D14Rik|432582|RIKEN cDNA E130309D14 gene	NM_001013784|E130309D14Rik|432582|RIKEN cDNA E130309D14 gene
mm9_v1_chr17_+_47730384_47730630	0.717848	HOX{A5,B5}.p2	AK165191|Ccnd3|12445|cyclin D3	NM_007632|Ccnd3|12445|cyclin D3	AK159503|Ccnd3|12445|cyclin D3	AK168290|Ccnd3|12445|cyclin D3	M86183|Ccnd3|12445|cyclin D3	BC004076|Ccnd3|12445|cyclin D3	BC005605|Ccnd3|12445|cyclin D3
mm9_v1_chr12_+_45429894_45429900	0.714833	HOX{A5,B5}.p2	AK048567|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule
mm9_v1_chr1_-_74590801_74590859	0.710366	HOX{A5,B5}.p2	BC139091|Usp37|319651|ubiquitin specific peptidase 37	AK133317|Usp37|319651|ubiquitin specific peptidase 37	AK030013|Usp37|319651|ubiquitin specific peptidase 37	NM_176972|Usp37|319651|ubiquitin specific peptidase 37
mm9_v1_chr11_+_30854464_30854475	0.70792	HOX{A5,B5}.p2	AK143580|Asb3|65257|ankyrin repeat and SOCS box-containing 3
mm9_v1_chr5_+_118619772_118619918	0.706635	HOX{A5,B5}.p2	BC128022|Hrk|12123|harakiri, BCL2 interacting protein (contains only BH3 domain)	D83698|Hrk|12123|harakiri, BCL2 interacting protein (contains only BH3 domain)	NM_007545|Hrk|12123|harakiri, BCL2 interacting protein (contains only BH3 domain)
mm9_v1_chrX_-_163647057_163647080	0.703151	HOX{A5,B5}.p2	BC018286|Tmsb4x|19241|thymosin, beta 4, X chromosome	X16053|Tmsb4x|19241|thymosin, beta 4, X chromosome
mm9_v1_chr19_-_7180162_7180222	0.700871	HOX{A5,B5}.p2	AY495668|Flrt1|396184|fibronectin leucine rich transmembrane protein 1	AK031503|Flrt1|396184|fibronectin leucine rich transmembrane protein 1	NM_201411|Flrt1|396184|fibronectin leucine rich transmembrane protein 1	BC070403|Flrt1|396184|fibronectin leucine rich transmembrane protein 1
mm9_v1_chr2_-_129135707_129135713	0.692074	HOX{A5,B5}.p2	AK156449|Il1a|16175|interleukin 1 alpha	NM_010554|Il1a|16175|interleukin 1 alpha	X01450|Il1a|16175|interleukin 1 alpha
mm9_v1_chr5_-_137974398_137974535	0.691448	HOX{A5,B5}.p2	BC062178|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	AK002604|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	AK151628|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	NM_010312|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	Y11970|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	AK146941|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2
mm9_v1_chr1_-_192988695_192988695	0.689442	HOX{A5,B5}.p2	AK133412|Fam71a|619288|family with sequence similarity 71, member A	NM_001109759|Fam71a|619288|family with sequence similarity 71, member A
mm9_v1_chr3_-_88964078_88964108	0.689149	HOX{A5,B5}.p2	AJ225124|Hcn3|15168|hyperpolarization-activated, cyclic nucleotide-gated K+ 3	NM_008227|Hcn3|15168|hyperpolarization-activated, cyclic nucleotide-gated K+ 3	AK032225|Hcn3|15168|hyperpolarization-activated, cyclic nucleotide-gated K+ 3
mm9_v1_chr19_+_4756524_4756619	0.686557	HOX{A5,B5}.p2	NM_025717|Rbm4b|66704|RNA binding motif protein 4B	AK006447|Rbm4b|66704|RNA binding motif protein 4B	AK032852|Rbm4b|66704|RNA binding motif protein 4B	AK019871|Rbm4b|66704|RNA binding motif protein 4B	AK142116|Rbm4b|66704|RNA binding motif protein 4B	AK160796|Rbm4b|66704|RNA binding motif protein 4B	AK014823|Rbm4b|66704|RNA binding motif protein 4B	AK028347|Rbm4b|66704|RNA binding motif protein 4B	BC019488|Rbm4b|66704|RNA binding motif protein 4B
mm9_v1_chr5_+_15124916_15124916	0.683792	HOX{A5,B5}.p2	AK017002|Speer4d|360220|spermatogenesis associated glutamate (E)-rich protein 4d	NM_025759|Speer4d|360220|spermatogenesis associated glutamate (E)-rich protein 4d
mm9_v1_chr15_-_72929166_72929248	0.683725	HOX{A5,B5}.p2	AK148725|2310051F07Rik|108745|RIKEN cDNA 2310051F07 gene
mm9_v1_chr8_+_91220965_91221031	0.681022	HOX{A5,B5}.p2	AK147426|Cyld|74256|cylindromatosis (turban tumor syndrome)	BC042438|Cyld|74256|cylindromatosis (turban tumor syndrome)	AK039054|Cyld|74256|cylindromatosis (turban tumor syndrome)
mm9_v1_chr9_-_63225395_63225495	0.678779	HOX{A5,B5}.p2	AK182797|Map2k5|23938|mitogen-activated protein kinase kinase 5
mm9_v1_chr8_+_87607167_87607182	0.678759	HOX{A5,B5}.p2	NM_010764|Man2b1|17159|mannosidase 2, alpha B1	AK169830|Man2b1|17159|mannosidase 2, alpha B1
mm9_v1_chr1_-_168339909_168339980	0.67643	HOX{A5,B5}.p2	AK031716|Pogk|71592|pogo transposable element with KRAB domain	BC072587|Pogk|71592|pogo transposable element with KRAB domain	AK048067|Pogk|71592|pogo transposable element with KRAB domain	AK048752|Pogk|71592|pogo transposable element with KRAB domain	AK053898|Pogk|71592|pogo transposable element with KRAB domain	NM_001142948|Pogk|71592|pogo transposable element with KRAB domain	NM_175170|Pogk|71592|pogo transposable element with KRAB domain
mm9_v1_chr2_-_148701126_148701154	0.673879	HOX{A5,B5}.p2	M59470|Cst3|13010|cystatin C	BC002072|Cst3|13010|cystatin C
mm9_v1_chr7_-_148136109_148136189	0.673548	HOX{A5,B5}.p2	EU380257|Ifitm5|73835|interferon induced transmembrane protein 5	AJ009781|Ifitm5|73835|interferon induced transmembrane protein 5	BC103790|Ifitm5|73835|interferon induced transmembrane protein 5	NM_053088|Ifitm5|73835|interferon induced transmembrane protein 5	AK003363|Ifitm5|73835|interferon induced transmembrane protein 5	FJ200451|Ifitm5|73835|interferon induced transmembrane protein 5
mm9_v1_chr9_+_64233432_64233531	0.673109	HOX{A5,B5}.p2	NM_001134399|Megf11|214058|multiple EGF-like-domains 11	NM_172522|Megf11|214058|multiple EGF-like-domains 11	AK048840|Megf11|214058|multiple EGF-like-domains 11	AK122555|Megf11|214058|multiple EGF-like-domains 11	AK051642|Megf11|214058|multiple EGF-like-domains 11	BC151157|Megf11|214058|multiple EGF-like-domains 11	BC172024|Megf11|214058|multiple EGF-like-domains 11
mm9_v1_chr15_-_88979923_88980035	0.668629	HOX{A5,B5}.p2	AK161190|Mapk11|19094|mitogen-activated protein kinase 11	BC057211|Mapk11|19094|mitogen-activated protein kinase 11	AK161562|Mapk11|19094|mitogen-activated protein kinase 11	BC064737|Mapk11|19094|mitogen-activated protein kinase 11	AK144846|Mapk11|19094|mitogen-activated protein kinase 11	AF135185|Mapk11|19094|mitogen-activated protein kinase 11	BC092526|Mapk11|19094|mitogen-activated protein kinase 11	NM_011161|Mapk11|19094|mitogen-activated protein kinase 11
mm9_v1_chrX_+_132528317_132528387	0.663566	HOX{A5,B5}.p2	AK018307|6530401D17Rik|76219|RIKEN cDNA 6530401D17 gene	NM_029823|2900062L11Rik|76976|RIKEN cDNA 2900062L11 gene	AK013740|2900062L11Rik|76976|RIKEN cDNA 2900062L11 gene	BC030351|2900062L11Rik|76976|RIKEN cDNA 2900062L11 gene	AK077432|2900062L11Rik|76976|RIKEN cDNA 2900062L11 gene
mm9_v1_chr1_+_34906775_34906890	0.660977	HOX{A5,B5}.p2	NM_145516|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	AK148653|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	BC057994|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	AK039771|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	AK166091|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	AF189817|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	AK149868|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	AK150074|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	AK082118|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	AK179998|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2
mm9_v1_chr15_+_92227240_92227311	0.660947	HOX{A5,B5}.p2	NM_001164593|Pdzrn4|239618|PDZ domain containing RING finger 4	BC151034|Pdzrn4|239618|PDZ domain containing RING finger 4
mm9_v1_chr11_+_30854397_30854410	0.660851	HOX{A5,B5}.p2	NM_023906|Asb3|65257|ankyrin repeat and SOCS box-containing 3	AK028489|Asb3|65257|ankyrin repeat and SOCS box-containing 3
mm9_v1_chr15_-_98764960_98764995	0.660296	HOX{A5,B5}.p2	AK158958|Tuba1b|22143|tubulin, alpha 1B
mm9_v1_chr3_-_88265103_88265103	0.65977	HOX{A5,B5}.p2	NM_001163489|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A	X85991|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chrY_+_234230_234474	0.653427	HOX{A5,B5}.p2	AK047790|Kdm5d|20592|lysine (K)-specific demethylase 5D	NM_011419|Kdm5d|20592|lysine (K)-specific demethylase 5D	AK141096|Kdm5d|20592|lysine (K)-specific demethylase 5D	AK140971|Kdm5d|20592|lysine (K)-specific demethylase 5D	BC060077|Kdm5d|20592|lysine (K)-specific demethylase 5D	AF127244|Kdm5d|20592|lysine (K)-specific demethylase 5D	AB221607|Kdm5d|20592|lysine (K)-specific demethylase 5D	Z29652|Kdm5d|20592|lysine (K)-specific demethylase 5D
mm9_v1_chrX_-_7475999_7476071	0.647574	HOX{A5,B5}.p2	BC157976|Pqbp1|54633|polyglutamine binding protein 1
mm9_v1_chr16_+_44765848_44765938	0.646292	HOX{A5,B5}.p2	NM_021325|Cd200r1|57781|CD200 receptor 1	AK154325|Cd200r1|57781|CD200 receptor 1	AK154722|Cd200r1|57781|CD200 receptor 1	BC052682|Cd200r1|57781|CD200 receptor 1	AK089173|Cd200r1|57781|CD200 receptor 1	AK089415|Cd200r1|57781|CD200 receptor 1	AK170735|Cd200r1|57781|CD200 receptor 1	AK171590|Cd200r1|57781|CD200 receptor 1	AK171130|Cd200r1|57781|CD200 receptor 1	AK054236|Cd200r1|57781|CD200 receptor 1
mm9_v1_chrX_-_105143713_105143774	0.641038	HOX{A5,B5}.p2	BC147603|Gm732|213450|predicted gene 732	BC147609|Gm732|213450|predicted gene 732	AK132985|Gm732|213450|predicted gene 732	NM_001033252|Gm732|213450|predicted gene 732
mm9_v1_chr8_+_97605076_97605133	0.637265	HOX{A5,B5}.p2	NM_028805|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK054173|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1
mm9_v1_chr11_-_102331042_102331196	0.634232	HOX{A5,B5}.p2	AK158443|Itga2b|16399|integrin alpha 2b	BC120493|Itga2b|16399|integrin alpha 2b	BC137570|Itga2b|16399|integrin alpha 2b	AK157012|Itga2b|16399|integrin alpha 2b	AF166384|Itga2b|16399|integrin alpha 2b	AF170316|Itga2b|16399|integrin alpha 2b	AK142289|Itga2b|16399|integrin alpha 2b	AK156872|Itga2b|16399|integrin alpha 2b	AK154619|Itga2b|16399|integrin alpha 2b	NM_010575|Itga2b|16399|integrin alpha 2b
mm9_v1_chr7_-_4796261_4796301	0.630409	HOX{A5,B5}.p2	NM_172737|Shisa7|232813|shisa homolog 7 (Xenopus laevis)
mm9_v1_chr17_+_89067999_89068044	0.627861	HOX{A5,B5}.p2	NM_023630|Gtf2a1l|71828|general transcription factor IIA, 1-like	BC050756|Gtf2a1l|71828|general transcription factor IIA, 1-like	AK005881|Gtf2a1l|71828|general transcription factor IIA, 1-like	AF250835|Gtf2a1l|71828|general transcription factor IIA, 1-like
mm9_v1_chr8_+_119619761_119619897	0.625398	HOX{A5,B5}.p2	AF294899|Bcmo1|63857|beta-carotene 15,15'-monooxygenase	AJ278064|Bcmo1|63857|beta-carotene 15,15'-monooxygenase	NM_001163028|Bcmo1|63857|beta-carotene 15,15'-monooxygenase	NM_021486|Bcmo1|63857|beta-carotene 15,15'-monooxygenase	AK146472|Bcmo1|63857|beta-carotene 15,15'-monooxygenase	BC125328|Bcmo1|63857|beta-carotene 15,15'-monooxygenase	BC125330|Bcmo1|63857|beta-carotene 15,15'-monooxygenase	BC145036|Bcmo1|63857|beta-carotene 15,15'-monooxygenase
mm9_v1_chrX_+_146981959_146981987	0.623418	HOX{A5,B5}.p2	NM_001102446|Alas2|11656|aminolevulinic acid synthase 2, erythroid	NM_009653|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK077610|Alas2|11656|aminolevulinic acid synthase 2, erythroid
mm9_v1_chr5_+_129242120_129242155	0.620276	HOX{A5,B5}.p2	AF438405|Piwil1|57749|piwi-like homolog 1 (Drosophila)	NM_021311|Piwil1|57749|piwi-like homolog 1 (Drosophila)	AB032604|Piwil1|57749|piwi-like homolog 1 (Drosophila)
mm9_v1_chr8_+_91220921_91220958	0.612979	HOX{A5,B5}.p2	NM_001128170|Cyld|74256|cylindromatosis (turban tumor syndrome)	NM_001128171|Cyld|74256|cylindromatosis (turban tumor syndrome)	NM_173369|Cyld|74256|cylindromatosis (turban tumor syndrome)	NM_001128169|Cyld|74256|cylindromatosis (turban tumor syndrome)	AK122389|Cyld|74256|cylindromatosis (turban tumor syndrome)	AK147204|Cyld|74256|cylindromatosis (turban tumor syndrome)
mm9_v1_chr9_-_108354707_108354736	0.610801	HOX{A5,B5}.p2	BC048918|Klhdc8b|78267|kelch domain containing 8B
mm9_v1_chr2_+_26828935_26829056	0.609987	HOX{A5,B5}.p2	AB071302|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13	NM_001001322|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13	AK157459|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13	AB112362|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13	EU034706|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13
mm9_v1_chr12_+_82732188_82732357	0.606214	HOX{A5,B5}.p2	AK172918|Ttc9|69480|tetratricopeptide repeat domain 9	BC028891|Ttc9|69480|tetratricopeptide repeat domain 9	AK133456|Ttc9|69480|tetratricopeptide repeat domain 9	NM_001033149|Ttc9|69480|tetratricopeptide repeat domain 9	BC139242|Ttc9|69480|tetratricopeptide repeat domain 9	BC139244|Ttc9|69480|tetratricopeptide repeat domain 9
mm9_v1_chr1_+_165859920_165859946	0.605565	HOX{A5,B5}.p2	AK030824|Scyl3|240880|SCY1-like 3 (S. cerevisiae)	AK044100|Scyl3|240880|SCY1-like 3 (S. cerevisiae)
mm9_v1_chr16_-_19706433_19706494	0.597491	HOX{A5,B5}.p2	NM_177356|Lamp3|239739|lysosomal-associated membrane protein 3
mm9_v1_chr9_-_78329444_78329551	0.596948	HOX{A5,B5}.p2	BC092053|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	BC095965|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	BC108391|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	BC018223|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	BC018485|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	BC083069|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	M22432|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK162313|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK166615|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK167873|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK032914|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK050635|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK151479|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK162440|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK164113|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK168467|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK003188|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK011771|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK012341|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK076696|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK081725|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK083361|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK088041|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK133725|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK135448|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK137223|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK141243|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK150798|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK151773|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK152810|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK152993|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK153387|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK153402|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK153851|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK162049|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK163799|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK164671|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK165938|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK166021|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK166033|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK166058|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK166089|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK166807|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK167843|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK168424|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	NM_010106|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1
mm9_v1_chr10_-_126648509_126648683	0.593022	HOX{A5,B5}.p2	BC021383|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma	AB054591|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma	AK148299|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma	AK140079|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma	NM_054097|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
mm9_v1_chr14_-_56503083_56503107	0.58654	HOX{A5,B5}.p2	BC065108|Cbln3|56410|cerebellin 3 precursor protein	NM_019820|Cbln3|56410|cerebellin 3 precursor protein
mm9_v1_chr1_+_168184269_168184413	0.58623	HOX{A5,B5}.p2	NM_001164528|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024494|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024495|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024496|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024497|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024498|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024499|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024500|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024501|Ildr2|100039795|immunoglobulin-like domain containing receptor 2
mm9_v1_chr4_-_109203808_109203901	0.585169	HOX{A5,B5}.p2	AK005726|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene	AK015869|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene	BC125547|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene	BC125549|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene	AK019777|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene	NM_026291|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene
mm9_v1_chr2_+_25356281_25356297	0.584998	HOX{A5,B5}.p2	AK019715|Fbxw5|30839|F-box and WD-40 domain protein 5	NM_013908|Fbxw5|30839|F-box and WD-40 domain protein 5
mm9_v1_chr2_-_90319326_90319330	0.582185	HOX{A5,B5}.p2	D83203|Ptprj|19271|protein tyrosine phosphatase, receptor type, J	NM_001135657|Ptprj|19271|protein tyrosine phosphatase, receptor type, J
mm9_v1_chr17_-_65991507_65991543	0.582159	HOX{A5,B5}.p2	BC060981|Txndc2|213272|thioredoxin domain containing 2 (spermatozoa)	NM_001146002|Txndc2|213272|thioredoxin domain containing 2 (spermatozoa)
mm9_v1_chr12_+_103996146_103996313	0.579872	HOX{A5,B5}.p2	BC094323|Ubr7|66622|ubiquitin protein ligase E3 component n-recognin 7 (putative)	AK088208|Ubr7|66622|ubiquitin protein ligase E3 component n-recognin 7 (putative)	AK146308|Ubr7|66622|ubiquitin protein ligase E3 component n-recognin 7 (putative)	NM_025666|Ubr7|66622|ubiquitin protein ligase E3 component n-recognin 7 (putative)	BC094423|Ubr7|66622|ubiquitin protein ligase E3 component n-recognin 7 (putative)	AK017542|Ubr7|66622|ubiquitin protein ligase E3 component n-recognin 7 (putative)	AK149989|Ubr7|66622|ubiquitin protein ligase E3 component n-recognin 7 (putative)	AK011968|Ubr7|66622|ubiquitin protein ligase E3 component n-recognin 7 (putative)	AK155611|Ubr7|66622|ubiquitin protein ligase E3 component n-recognin 7 (putative)
mm9_v1_chr17_+_35530986_35531054	0.579143	HOX{A5,B5}.p2	AK013097|H2-Q8|15019|histocompatibility 2, Q region locus 8	NM_023124|H2-Q8|15019|histocompatibility 2, Q region locus 8
mm9_v1_chr14_-_70689083_70689258	0.577179	HOX{A5,B5}.p2	BC046617|Ppp3cc|19057|protein phosphatase 3, catalytic subunit, gamma isoform	BC141079|Ppp3cc|19057|protein phosphatase 3, catalytic subunit, gamma isoform	BC145347|Ppp3cc|19057|protein phosphatase 3, catalytic subunit, gamma isoform	M81475|Ppp3cc|19057|protein phosphatase 3, catalytic subunit, gamma isoform	NM_008915|Ppp3cc|19057|protein phosphatase 3, catalytic subunit, gamma isoform	AK015002|Ppp3cc|19057|protein phosphatase 3, catalytic subunit, gamma isoform
mm9_v1_chr10_+_23640161_23640211	0.576336	HOX{A5,B5}.p2	BC125368|Taar1|111174|trace amine-associated receptor 1	BC125370|Taar1|111174|trace amine-associated receptor 1	NM_053205|Taar1|111174|trace amine-associated receptor 1
mm9_v1_chr2_+_103962925_103962966	0.571361	HOX{A5,B5}.p2	AK020874|A930018P22Rik|68243|RIKEN cDNA A930018P22 gene	NM_026634|A930018P22Rik|68243|RIKEN cDNA A930018P22 gene	AK006944|A930018P22Rik|68243|RIKEN cDNA A930018P22 gene	BC048438|A930018P22Rik|68243|RIKEN cDNA A930018P22 gene
mm9_v1_chr11_+_79404713_79404722	0.570298	HOX{A5,B5}.p2	AK046734|Rab11fip4|268451|RAB11 family interacting protein 4 (class II)	NM_175543|Rab11fip4|268451|RAB11 family interacting protein 4 (class II)
mm9_v1_chr6_+_48696256_48696297	0.567496	HOX{A5,B5}.p2	AK087249|Gimap5|317757|GTPase, IMAP family member 5	AK052694|Gimap5|317757|GTPase, IMAP family member 5	BC095995|Gimap5|317757|GTPase, IMAP family member 5	AK054194|Gimap5|317757|GTPase, IMAP family member 5
mm9_v1_chr10_+_60760581_60760583	0.563368	HOX{A5,B5}.p2	X60165|Prf1|18646|perforin 1 (pore forming protein)	BC132300|Prf1|18646|perforin 1 (pore forming protein)	BC137962|Prf1|18646|perforin 1 (pore forming protein)	NM_011073|Prf1|18646|perforin 1 (pore forming protein)
mm9_v1_chrX_-_7182450_7182545	0.561049	HOX{A5,B5}.p2	BC011195|Ccdc22|54638|coiled-coil domain containing 22	AK010536|Ccdc22|54638|coiled-coil domain containing 22	AF229637|Ccdc22|54638|coiled-coil domain containing 22	AK039573|Ccdc22|54638|coiled-coil domain containing 22	NM_138603|Ccdc22|54638|coiled-coil domain containing 22
mm9_v1_chr7_-_20044133_20044198	0.559768	HOX{A5,B5}.p2	AK146784|Mark4|232944|MAP/microtubule affinity-regulating kinase 4
mm9_v1_chr5_-_45190857_45190945	0.554777	HOX{A5,B5}.p2	U89487|Ldb2|16826|LIM domain binding 2	U89489|Ldb2|16826|LIM domain binding 2	BC079611|Ldb2|16826|LIM domain binding 2	AK147160|Ldb2|16826|LIM domain binding 2	AK146860|Ldb2|16826|LIM domain binding 2	NM_001077398|Ldb2|16826|LIM domain binding 2	NM_010698|Ldb2|16826|LIM domain binding 2
mm9_v1_chr1_-_173152634_173152646	0.551644	HOX{A5,B5}.p2	AK028388|Tomm40l|641376|translocase of outer mitochondrial membrane 40 homolog-like (yeast)	NM_001037170|Tomm40l|641376|translocase of outer mitochondrial membrane 40 homolog-like (yeast)
mm9_v1_chr1_+_69998194_69998221	0.547807	HOX{A5,B5}.p2	AK014865|Spag16|66722|sperm associated antigen 16	AK016618|Spag16|66722|sperm associated antigen 16	NM_025728|Spag16|66722|sperm associated antigen 16	AK016352|Spag16|66722|sperm associated antigen 16
mm9_v1_chr2_+_23062995_23062995	0.547407	HOX{A5,B5}.p2	AK016475|4931423N10Rik|70981|RIKEN cDNA 4931423N10 gene	NM_027635|4931423N10Rik|70981|RIKEN cDNA 4931423N10 gene
mm9_v1_chr10_+_23571267_23571295	0.545181	HOX{A5,B5}.p2	NM_011979|Vnn3|26464|vanin 3	AJ132103|Vnn3|26464|vanin 3	BC111521|Vnn3|26464|vanin 3
mm9_v1_chr7_-_134968017_134968064	0.539958	HOX{A5,B5}.p2	NM_024414|Stx1b|56216|syntaxin 1B
mm9_v1_chr13_-_22101607_22101636	0.539538	HOX{A5,B5}.p2	BC125481|Prss16|54373|protease, serine, 16 (thymus)	BC131955|Prss16|54373|protease, serine, 16 (thymus)	AJ131775|Prss16|54373|protease, serine, 16 (thymus)	NM_019429|Prss16|54373|protease, serine, 16 (thymus)	AK037514|Prss16|54373|protease, serine, 16 (thymus)	AK088019|Prss16|54373|protease, serine, 16 (thymus)
mm9_v1_chr4_-_118130054_118130099	0.539109	HOX{A5,B5}.p2	AF360122|Mpl|17480|myeloproliferative leukemia virus oncogene	X73677|Mpl|17480|myeloproliferative leukemia virus oncogene	BC146612|Mpl|17480|myeloproliferative leukemia virus oncogene	BC101943|Mpl|17480|myeloproliferative leukemia virus oncogene	BC103513|Mpl|17480|myeloproliferative leukemia virus oncogene	BC103514|Mpl|17480|myeloproliferative leukemia virus oncogene	BC103515|Mpl|17480|myeloproliferative leukemia virus oncogene	BC146613|Mpl|17480|myeloproliferative leukemia virus oncogene	Z22649|Mpl|17480|myeloproliferative leukemia virus oncogene	AK041166|Mpl|17480|myeloproliferative leukemia virus oncogene	NM_001122949|Mpl|17480|myeloproliferative leukemia virus oncogene	NM_010823|Mpl|17480|myeloproliferative leukemia virus oncogene
mm9_v1_chrX_-_99266499_99266645	0.538011	HOX{A5,B5}.p2	BC132391|Rgag4|331474|retrotransposon gag domain containing 4	BC137795|Rgag4|331474|retrotransposon gag domain containing 4	AK032151|Rgag4|331474|retrotransposon gag domain containing 4	AK220436|Rgag4|331474|retrotransposon gag domain containing 4	NM_183318|Rgag4|331474|retrotransposon gag domain containing 4
mm9_v1_chr14_-_8164908_8164908	0.536733	HOX{A5,B5}.p2	BC090991|Gm5797|545013|predicted gene 5797	NM_001025085|Gm5797|545013|predicted gene 5797
mm9_v1_chr12_-_11215753_11215777	0.530763	HOX{A5,B5}.p2	AF261105|Msgn1|56184|mesogenin 1	NM_019544|Msgn1|56184|mesogenin 1	BC116996|Msgn1|56184|mesogenin 1
mm9_v1_chr14_-_56503058_56503074	0.522354	HOX{A5,B5}.p2	AK081085|Cbln3|56410|cerebellin 3 precursor protein	AF218379|Cbln3|56410|cerebellin 3 precursor protein
mm9_v1_chr9_+_108893946_108894060	0.519577	HOX{A5,B5}.p2	BC057594|Pfkfb4|270198|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	EU571215|Pfkfb4|270198|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	NM_173019|Pfkfb4|270198|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	EU571216|Pfkfb4|270198|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	EU571217|Pfkfb4|270198|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	AK155172|Pfkfb4|270198|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	AY646092|Pfkfb4|270198|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	AY707862|Pfkfb4|270198|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	AY756065|Pfkfb4|270198|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	AY756066|Pfkfb4|270198|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	AY756067|Pfkfb4|270198|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	DQ350638|Pfkfb4|270198|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
mm9_v1_chr8_+_24780132_24780145	0.519144	HOX{A5,B5}.p2	AK140391|Zmat4|320158|zinc finger, matrin type 4	AK140413|Zmat4|320158|zinc finger, matrin type 4	NM_177086|Zmat4|320158|zinc finger, matrin type 4	AK036254|Zmat4|320158|zinc finger, matrin type 4	AK134793|Zmat4|320158|zinc finger, matrin type 4	BC065110|Zmat4|320158|zinc finger, matrin type 4	BC079657|Zmat4|320158|zinc finger, matrin type 4
mm9_v1_chr2_+_25207442_25207454	0.518957	HOX{A5,B5}.p2	AK202103|Man1b1|227619|mannosidase, alpha, class 1B, member 1	AK219126|Man1b1|227619|mannosidase, alpha, class 1B, member 1
mm9_v1_chr6_-_28399248_28399339	0.516765	HOX{A5,B5}.p2	BC131908|Pax4|18506|paired box gene 4	BC131906|Pax4|18506|paired box gene 4	BC145168|Pax4|18506|paired box gene 4	BC145169|Pax4|18506|paired box gene 4	AB010557|Pax4|18506|paired box gene 4	AF145233|Pax4|18506|paired box gene 4	AB010558|Pax4|18506|paired box gene 4	AB008912|Pax4|18506|paired box gene 4	NM_001159925|Pax4|18506|paired box gene 4	NM_001159926|Pax4|18506|paired box gene 4	NM_011038|Pax4|18506|paired box gene 4
mm9_v1_chr7_-_4729604_4729742	0.514527	HOX{A5,B5}.p2	BC134354|Il11|16156|interleukin 11	U03421|Il11|16156|interleukin 11	NM_008350|Il11|16156|interleukin 11
mm9_v1_chr8_+_91220959_91220964	0.5112	HOX{A5,B5}.p2	AK042764|Cyld|74256|cylindromatosis (turban tumor syndrome)	AK167424|Cyld|74256|cylindromatosis (turban tumor syndrome)	AK133479|Cyld|74256|cylindromatosis (turban tumor syndrome)
mm9_v1_chr17_-_26335980_26336160	0.510022	HOX{A5,B5}.p2	AK007743|Pdia2|69191|protein disulfide isomerase associated 2	BC116671|Pdia2|69191|protein disulfide isomerase associated 2	NM_001081070|Pdia2|69191|protein disulfide isomerase associated 2
mm9_v1_chr17_-_34740422_34740567	0.509745	HOX{A5,B5}.p2	BC012031|Rnf5|54197|ring finger protein 5	AK012729|Rnf5|54197|ring finger protein 5	AK020514|Rnf5|54197|ring finger protein 5	BC016449|Rnf5|54197|ring finger protein 5	NM_019403|Rnf5|54197|ring finger protein 5	AK019289|Rnf5|54197|ring finger protein 5	AK020515|Rnf5|54197|ring finger protein 5	AK010792|Rnf5|54197|ring finger protein 5
mm9_v1_chrX_+_35954355_35954475	0.508956	HOX{A5,B5}.p2	AK138385|Mcts1|68995|malignant T cell amplified sequence 1	BC037103|Mcts1|68995|malignant T cell amplified sequence 1
mm9_v1_chr15_-_99762083_99762088	0.507304	HOX{A5,B5}.p2	AK006542|1700030F18Rik|72277|RIKEN cDNA 1700030F18 gene	BC048613|1700030F18Rik|72277|RIKEN cDNA 1700030F18 gene	NM_028180|1700030F18Rik|72277|RIKEN cDNA 1700030F18 gene
mm9_v1_chr14_+_55506625_55506792	0.506649	HOX{A5,B5}.p2	AK020321|Bcl2l2|12050|BCL2-like 2	AK020923|Bcl2l2|12050|BCL2-like 2
mm9_v1_chrX_-_101396356_101396482	0.505456	HOX{A5,B5}.p2	AK220439|C77370|245555|expressed sequence C77370	DQ975302|C77370|245555|expressed sequence C77370	DQ975303|C77370|245555|expressed sequence C77370	NM_001077354|C77370|245555|expressed sequence C77370	AK038635|C77370|245555|expressed sequence C77370
mm9_v1_chr9_+_70390703_70390723	0.500516	HOX{A5,B5}.p2	AK162780|Sltm|66660|SAFB-like, transcription modulator	AK017839|Sltm|66660|SAFB-like, transcription modulator
mm9_v1_chr17_+_12571494_12571524	0.496816	HOX{A5,B5}.p2	BC057186|Plg|18815|plasminogen	AK132254|Plg|18815|plasminogen	J04766|Plg|18815|plasminogen	AK040840|Plg|18815|plasminogen
mm9_v1_chr15_-_79913763_79913849	0.496145	HOX{A5,B5}.p2	BC094059|Rpl3|27367|ribosomal protein L3	BC083134|Rpl3|27367|ribosomal protein L3	Y00225|Rpl3|27367|ribosomal protein L3	BC009655|Rpl3|27367|ribosomal protein L3	BC085495|Rpl3|27367|ribosomal protein L3	AK166433|Rpl3|27367|ribosomal protein L3	AK169321|Rpl3|27367|ribosomal protein L3	AK168126|Rpl3|27367|ribosomal protein L3	AK168224|Rpl3|27367|ribosomal protein L3	AK168744|Rpl3|27367|ribosomal protein L3	AK168040|Rpl3|27367|ribosomal protein L3	AK168059|Rpl3|27367|ribosomal protein L3	AK168128|Rpl3|27367|ribosomal protein L3	AK170819|Rpl3|27367|ribosomal protein L3	AK088993|Rpl3|27367|ribosomal protein L3	AK144518|Rpl3|27367|ribosomal protein L3	AK144816|Rpl3|27367|ribosomal protein L3	AK146502|Rpl3|27367|ribosomal protein L3	AK149494|Rpl3|27367|ribosomal protein L3	AK151057|Rpl3|27367|ribosomal protein L3	AK151084|Rpl3|27367|ribosomal protein L3	AK151142|Rpl3|27367|ribosomal protein L3	AK151426|Rpl3|27367|ribosomal protein L3	AK151596|Rpl3|27367|ribosomal protein L3	AK151740|Rpl3|27367|ribosomal protein L3	AK166825|Rpl3|27367|ribosomal protein L3	AK167787|Rpl3|27367|ribosomal protein L3	AK167947|Rpl3|27367|ribosomal protein L3	AK169060|Rpl3|27367|ribosomal protein L3	AK169235|Rpl3|27367|ribosomal protein L3	AK172280|Rpl3|27367|ribosomal protein L3	BC158039|Rpl3|27367|ribosomal protein L3	NM_013762|Rpl3|27367|ribosomal protein L3
mm9_v1_chr1_+_192748986_192748990	0.492142	HOX{A5,B5}.p2	NM_001199020|Angel2|52477|angel homolog 2 (Drosophila)	AK135709|Angel2|52477|angel homolog 2 (Drosophila)	AK166619|Angel2|52477|angel homolog 2 (Drosophila)
mm9_v1_chr4_-_122563074_122563173	0.491685	HOX{A5,B5}.p2	AK169652|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK144094|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK165565|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK171388|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK162629|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK137222|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK128889|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	L12367|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK158150|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK170901|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK156556|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK053351|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	NM_007598|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)
mm9_v1_chr8_-_119098475_119098517	0.488319	HOX{A5,B5}.p2	
mm9_v1_chr14_-_57397125_57397185	0.486916	HOX{A5,B5}.p2	BC026772|Pspc1|66645|paraspeckle protein 1	AK011272|Pspc1|66645|paraspeckle protein 1	AK017689|Pspc1|66645|paraspeckle protein 1	AK150823|Pspc1|66645|paraspeckle protein 1	AK160722|Pspc1|66645|paraspeckle protein 1	NM_025682|Pspc1|66645|paraspeckle protein 1
mm9_v1_chr10_-_53638995_53639134	0.486607	HOX{A5,B5}.p2	AK204950|Man1a|17155|mannosidase 1, alpha	AK192972|Man1a|17155|mannosidase 1, alpha	AK191835|Man1a|17155|mannosidase 1, alpha	AK196316|Man1a|17155|mannosidase 1, alpha	AK196883|Man1a|17155|mannosidase 1, alpha	AK201818|Man1a|17155|mannosidase 1, alpha	AK211829|Man1a|17155|mannosidase 1, alpha
mm9_v1_chr10_-_117261663_117261731	0.48476	HOX{A5,B5}.p2	M79314|Rap1b|215449|RAS related protein 1b	BC147700|Rap1b|215449|RAS related protein 1b	BC147713|Rap1b|215449|RAS related protein 1b
mm9_v1_chrX_-_6998125_6998251	0.478097	HOX{A5,B5}.p2	BC042200|2010204K13Rik|68355|RIKEN cDNA 2010204K13 gene	BC061056|2010204K13Rik|68355|RIKEN cDNA 2010204K13 gene	AK077356|2010204K13Rik|68355|RIKEN cDNA 2010204K13 gene
mm9_v1_chr9_-_49606959_49607009	0.477888	HOX{A5,B5}.p2	AK053403|Ncam1|17967|neural cell adhesion molecule 1	BC062942|Ncam1|17967|neural cell adhesion molecule 1	X15049|Ncam1|17967|neural cell adhesion molecule 1	Y00051|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr5_-_100407805_100407989	0.476786	HOX{A5,B5}.p2	U11273|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D	AK135733|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D	AK077409|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D	BC049098|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D	NM_001077265|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D	NM_001077266|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D	NM_001077267|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D	NM_007516|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D
mm9_v1_chr13_-_67830018_67830109	0.476726	HOX{A5,B5}.p2	BC016248|Zfp71-rs1|235907|zinc finger protein 71, related sequence	AK041786|Zfp71-rs1|235907|zinc finger protein 71, related sequence	NM_145622|Zfp71-rs1|235907|zinc finger protein 71, related sequence
mm9_v1_chr12_-_12948513_12948641	0.476575	HOX{A5,B5}.p2	BC005453|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK144126|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK146913|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK146696|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	NM_008709|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm9_v1_chr7_+_25292201_25292230	0.476239	HOX{A5,B5}.p2	BC096675|Zfp428|232969|zinc finger protein 428	BC024802|Zfp428|232969|zinc finger protein 428	AK010415|Zfp428|232969|zinc finger protein 428
mm9_v1_chr16_-_19706367_19706382	0.4702	HOX{A5,B5}.p2	AJ510130|Lamp3|239739|lysosomal-associated membrane protein 3
mm9_v1_chr7_-_59271085_59271085	0.469625	HOX{A5,B5}.p2	AK005994|1700015G11Rik|75529|RIKEN cDNA 1700015G11 gene	NM_001195601|1700015G11Rik|75529|RIKEN cDNA 1700015G11 gene
mm9_v1_chr17_-_23820984_23820992	0.469305	HOX{A5,B5}.p2	BC058186|Cldn9|56863|claudin 9	NM_020293|Cldn9|56863|claudin 9
mm9_v1_chr1_-_133173495_133173524	0.467529	HOX{A5,B5}.p2	BC037446|Ikbke|56489|inhibitor of kappaB kinase epsilon
mm9_v1_chr7_-_6282035_6282035	0.465004	HOX{A5,B5}.p2	AK133380|Zfp583|213011|zinc finger protein 583	NM_001033249|Zfp583|213011|zinc finger protein 583
mm9_v1_chr19_-_7557553_7557640	0.459901	HOX{A5,B5}.p2	AY507126|Rtn3|20168|reticulon 3	AK146505|Rtn3|20168|reticulon 3
mm9_v1_chr7_-_55237665_55237665	0.455928	HOX{A5,B5}.p2	AY042194|Mrgpra4|235854|MAS-related GPR, member A4	NM_153524|Mrgpra4|235854|MAS-related GPR, member A4
mm9_v1_chr6_+_126803115_126803190	0.45512	HOX{A5,B5}.p2	NM_009650|Akap3|11642|A kinase (PRKA) anchor protein 3	BC100458|Akap3|11642|A kinase (PRKA) anchor protein 3	AF093406|Akap3|11642|A kinase (PRKA) anchor protein 3
mm9_v1_chr17_+_85489891_85489912	0.450179	HOX{A5,B5}.p2	BC138272|1700106N22Rik|73582|RIKEN cDNA 1700106N22 gene	BC138273|1700106N22Rik|73582|RIKEN cDNA 1700106N22 gene
mm9_v1_chr5_+_144225348_144225362	0.449543	HOX{A5,B5}.p2	NM_144915|Daglb|231871|diacylglycerol lipase, beta
mm9_v1_chr8_+_94190341_94190551	0.44416	HOX{A5,B5}.p2	
mm9_v1_chr11_+_68939734_68939879	0.443467	HOX{A5,B5}.p2	NM_011786|Aloxe3|23801|arachidonate lipoxygenase 3	Y14695|Aloxe3|23801|arachidonate lipoxygenase 3	BC116258|Aloxe3|23801|arachidonate lipoxygenase 3	BC116259|Aloxe3|23801|arachidonate lipoxygenase 3
mm9_v1_chr6_-_125115619_125115626	0.441289	HOX{A5,B5}.p2	AK160753|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK164415|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	GU214026|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK002273|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK081405|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK140794|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK146435|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK147738|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK147891|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK160399|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK168217|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase
mm9_v1_chr6_-_145383444_145383444	0.437152	HOX{A5,B5}.p2	AK016641|Ifltd1|74071|intermediate filament tail domain containing 1	NM_028742|Ifltd1|74071|intermediate filament tail domain containing 1
mm9_v1_chr2_+_153171730_153171874	0.436105	HOX{A5,B5}.p2	AK122413|Asxl1|228790|additional sex combs like 1 (Drosophila)	NM_001039939|Asxl1|228790|additional sex combs like 1 (Drosophila)
mm9_v1_chr5_+_139882322_139882418	0.431341	HOX{A5,B5}.p2	AK171460|C130050O18Rik|319772|RIKEN cDNA C130050O18 gene	NM_177000|C130050O18Rik|319772|RIKEN cDNA C130050O18 gene	AK155269|C130050O18Rik|319772|RIKEN cDNA C130050O18 gene	AK048344|C130050O18Rik|319772|RIKEN cDNA C130050O18 gene	AK086625|C130050O18Rik|319772|RIKEN cDNA C130050O18 gene	AK170398|C130050O18Rik|319772|RIKEN cDNA C130050O18 gene
mm9_v1_chrX_-_163647088_163647149	0.430069	HOX{A5,B5}.p2	AK010659|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK088783|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK162286|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK169718|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK169108|Tmsb4x|19241|thymosin, beta 4, X chromosome	NM_021278|Tmsb4x|19241|thymosin, beta 4, X chromosome
mm9_v1_chr14_+_71290334_71290389	0.425502	HOX{A5,B5}.p2	AF079107|Gfra2|14586|glial cell line derived neurotrophic factor family receptor alpha 2	AF079108|Gfra2|14586|glial cell line derived neurotrophic factor family receptor alpha 2
mm9_v1_chr16_+_97757687_97757704	0.422455	HOX{A5,B5}.p2	AK143831|Mx2|17858|myxovirus (influenza virus) resistance 2	AB029920|Mx2|17858|myxovirus (influenza virus) resistance 2	J03368|Mx2|17858|myxovirus (influenza virus) resistance 2	NM_013606|Mx2|17858|myxovirus (influenza virus) resistance 2	BC007127|Mx2|17858|myxovirus (influenza virus) resistance 2
mm9_v1_chr17_+_47767638_47767638	0.420243	HOX{A5,B5}.p2	BC060712|Usp49|224836|ubiquitin specific peptidase 49	NM_198421|Usp49|224836|ubiquitin specific peptidase 49
mm9_v1_chr17_-_56601559_56601662	0.419404	HOX{A5,B5}.p2	BC054077|Ptprs|19280|protein tyrosine phosphatase, receptor type, S	AK038176|Ptprs|19280|protein tyrosine phosphatase, receptor type, S
mm9_v1_chr4_+_51229549_51229549	0.416367	HOX{A5,B5}.p2	AK015651|Cylc2|74914|cylicin, basic protein of sperm head cytoskeleton 2	NM_001162865|Cylc2|74914|cylicin, basic protein of sperm head cytoskeleton 2
mm9_v1_chr11_+_113510855_113510863	0.414124	HOX{A5,B5}.p2	AF109377|Cog1|16834|component of oligomeric golgi complex 1	BC063056|Cog1|16834|component of oligomeric golgi complex 1
mm9_v1_chr6_-_119988039_119988126	0.408972	HOX{A5,B5}.p2	AK160909|Wnk1|232341|WNK lysine deficient protein kinase 1	BC020278|Wnk1|232341|WNK lysine deficient protein kinase 1
mm9_v1_chr8_+_47020002_47020015	0.403247	HOX{A5,B5}.p2	AK132742|Ccdc110|212392|coiled-coil domain containing 110	NM_001033246|Ccdc110|212392|coiled-coil domain containing 110	AK161248|Ccdc110|212392|coiled-coil domain containing 110
mm9_v1_chr18_-_34666454_34666491	0.402973	HOX{A5,B5}.p2	AK029766|Fam13b|225358|family with sequence similarity 13, member B	BC031465|Fam13b|225358|family with sequence similarity 13, member B	NM_146084|Fam13b|225358|family with sequence similarity 13, member B	AK084711|Fam13b|225358|family with sequence similarity 13, member B
mm9_v1_chr11_-_21471767_21471820	0.401587	HOX{A5,B5}.p2	AK168545|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	AK002404|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	BC050940|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	AK008270|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	AK002395|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	M29462|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	AK164785|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	AK077724|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	AK046369|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)
mm9_v1_chr17_-_26978455_26978553	0.401575	HOX{A5,B5}.p2	NM_008700|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)	X75415|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)
mm9_v1_chr9_+_99143756_99143900	0.401128	HOX{A5,B5}.p2	AK021095|Cep70|68121|centrosomal protein 70	AK020622|Cep70|68121|centrosomal protein 70	AF242319|Cep70|68121|centrosomal protein 70	AK049326|Cep70|68121|centrosomal protein 70	AK133048|Cep70|68121|centrosomal protein 70	BC071260|Cep70|68121|centrosomal protein 70	NM_023873|Cep70|68121|centrosomal protein 70	BC050819|Cep70|68121|centrosomal protein 70	AK020174|Cep70|68121|centrosomal protein 70
mm9_v1_chr16_-_10790997_10791006	0.399858	HOX{A5,B5}.p2	BC049598|Prm3|19120|protamine 3	BC061127|Prm3|19120|protamine 3	AK132894|Prm3|19120|protamine 3	NM_013638|Prm3|19120|protamine 3
mm9_v1_chr13_+_67931962_67932042	0.398771	HOX{A5,B5}.p2	BC100427|Gm10037|328280|predicted gene 10037
mm9_v1_chr5_+_123678198_123678324	0.396472	HOX{A5,B5}.p2	NM_026000|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK011984|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK145487|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK168863|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK005216|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK011863|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	BC060245|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK168339|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK002280|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK010276|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	BC051930|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
mm9_v1_chr2_-_173411352_173411489	0.394996	HOX{A5,B5}.p2	AK080176|Ppp4r1l-ps|100043911|protein phosphatase 4, regulatory subunit 1-like, pseudogene	AK046376|Ppp4r1l-ps|100043911|protein phosphatase 4, regulatory subunit 1-like, pseudogene
mm9_v1_chr1_-_163718415_163718625	0.394626	HOX{A5,B5}.p2	AF288572|Fasl|14103|Fas ligand (TNF superfamily, member 6)	DQ846747|Fasl|14103|Fas ligand (TNF superfamily, member 6)	U58995|Fasl|14103|Fas ligand (TNF superfamily, member 6)	S76752|Fasl|14103|Fas ligand (TNF superfamily, member 6)	AF119335|Fasl|14103|Fas ligand (TNF superfamily, member 6)	U06948|Fasl|14103|Fas ligand (TNF superfamily, member 6)	U10984|Fasl|14103|Fas ligand (TNF superfamily, member 6)	AK141268|Fasl|14103|Fas ligand (TNF superfamily, member 6)	AK040139|Fasl|14103|Fas ligand (TNF superfamily, member 6)	NM_010177|Fasl|14103|Fas ligand (TNF superfamily, member 6)
mm9_v1_chr15_-_72926936_72926959	0.393876	HOX{A5,B5}.p2	AK003962|1110029L17Rik|68722|RIKEN cDNA 1110029L17 gene
mm9_v1_chr2_+_180444945_180445046	0.393795	HOX{A5,B5}.p2	AK009106|2310003C23Rik|76425|RIKEN cDNA 2310003C23 gene	BC052539|2310003C23Rik|76425|RIKEN cDNA 2310003C23 gene
mm9_v1_chrX_-_5660523_5660537	0.393705	HOX{A5,B5}.p2	BC100377|AU022751|102991|expressed sequence AU022751	AK087702|AU022751|102991|expressed sequence AU022751	AK136005|AU022751|102991|expressed sequence AU022751	AK166653|AU022751|102991|expressed sequence AU022751	NM_001033211|AU022751|102991|expressed sequence AU022751	NM_001166433|AU022751|102991|expressed sequence AU022751
mm9_v1_chr7_+_13097884_13097899	0.392941	HOX{A5,B5}.p2	AK013837|2900092C05Rik|73090|RIKEN cDNA 2900092C05 gene	BC099547|2900092C05Rik|73090|RIKEN cDNA 2900092C05 gene	BC087883|2900092C05Rik|73090|RIKEN cDNA 2900092C05 gene	NM_028434|2900092C05Rik|73090|RIKEN cDNA 2900092C05 gene
mm9_v1_chr16_-_44332950_44332950	0.392288	HOX{A5,B5}.p2	BC079584|Sidt1|320007|SID1 transmembrane family, member 1	NM_001159419|Sidt1|320007|SID1 transmembrane family, member 1	NM_198034|Sidt1|320007|SID1 transmembrane family, member 1
mm9_v1_chr11_+_51817722_51817929	0.3919	HOX{A5,B5}.p2	AK046394|Cdkl3|213084|cyclin-dependent kinase-like 3	NM_001166653|Cdkl3|213084|cyclin-dependent kinase-like 3	NM_001166654|Cdkl3|213084|cyclin-dependent kinase-like 3	NM_001166655|Cdkl3|213084|cyclin-dependent kinase-like 3	NM_001166656|Cdkl3|213084|cyclin-dependent kinase-like 3	NM_001166657|Cdkl3|213084|cyclin-dependent kinase-like 3	NM_153785|Cdkl3|213084|cyclin-dependent kinase-like 3	AK050990|Cdkl3|213084|cyclin-dependent kinase-like 3	AK078804|Cdkl3|213084|cyclin-dependent kinase-like 3	AK090045|Cdkl3|213084|cyclin-dependent kinase-like 3	AK045036|Cdkl3|213084|cyclin-dependent kinase-like 3	AK166428|Cdkl3|213084|cyclin-dependent kinase-like 3	AK045356|Cdkl3|213084|cyclin-dependent kinase-like 3	BC028871|Cdkl3|213084|cyclin-dependent kinase-like 3	AK186403|Cdkl3|213084|cyclin-dependent kinase-like 3	AK210497|Cdkl3|213084|cyclin-dependent kinase-like 3
mm9_v1_chr18_-_10029925_10030160	0.390405	HOX{A5,B5}.p2	AB034633|Usp14|59025|ubiquitin specific peptidase 14	BC050197|Usp14|59025|ubiquitin specific peptidase 14	AK045909|Usp14|59025|ubiquitin specific peptidase 14	BC005571|Usp14|59025|ubiquitin specific peptidase 14	AK029977|Usp14|59025|ubiquitin specific peptidase 14	AK160215|Usp14|59025|ubiquitin specific peptidase 14	AK011322|Usp14|59025|ubiquitin specific peptidase 14	AK172477|Usp14|59025|ubiquitin specific peptidase 14	AK170933|Usp14|59025|ubiquitin specific peptidase 14	NM_001038589|Usp14|59025|ubiquitin specific peptidase 14	NM_021522|Usp14|59025|ubiquitin specific peptidase 14
mm9_v1_chr11_+_81915343_81915390	0.388858	HOX{A5,B5}.p2	AK012356|Ccl12|20293|chemokine (C-C motif) ligand 12	NM_011331|Ccl12|20293|chemokine (C-C motif) ligand 12	U50712|Ccl12|20293|chemokine (C-C motif) ligand 12	U66670|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065934|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065935|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065936|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065937|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065938|Ccl12|20293|chemokine (C-C motif) ligand 12	BC027520|Ccl12|20293|chemokine (C-C motif) ligand 12
mm9_v1_chr9_+_14080805_14080923	0.38758	HOX{A5,B5}.p2	AK017464|Sesn3|75747|sestrin 3	BC132086|Sesn3|75747|sestrin 3	BC138690|Sesn3|75747|sestrin 3
mm9_v1_chr1_-_173152548_173152594	0.386611	HOX{A5,B5}.p2	AK012264|Tomm40l|641376|translocase of outer mitochondrial membrane 40 homolog-like (yeast)
mm9_v1_chr5_-_100391613_100391631	0.381175	HOX{A5,B5}.p2	AK012230|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D
mm9_v1_chr10_+_79764564_79764564	0.380577	HOX{A5,B5}.p2	NM_011789|Apc2|23805|adenomatosis polyposis coli 2
mm9_v1_chr17_-_31301966_31301997	0.375288	HOX{A5,B5}.p2	Z21858|Tff1|21784|trefoil factor 1	AK008625|Tff1|21784|trefoil factor 1	AK008809|Tff1|21784|trefoil factor 1	AK010179|Tff1|21784|trefoil factor 1	AK160174|Tff1|21784|trefoil factor 1	BC117054|Tff1|21784|trefoil factor 1	BC117056|Tff1|21784|trefoil factor 1	AK008873|Tff1|21784|trefoil factor 1	AK131896|Tff1|21784|trefoil factor 1	NM_009362|Tff1|21784|trefoil factor 1
mm9_v1_chr6_-_125115580_125115612	0.373883	HOX{A5,B5}.p2	BC093508|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC083149|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC091768|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC094037|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK191938|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK192040|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK199608|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK201736|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC085315|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC145810|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC145812|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	M32599|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC023196|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC092267|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC083065|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC095932|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC082592|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC092294|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	NM_008084|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC083079|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC085275|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC083080|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC085274|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC092252|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC020407|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC092264|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC096440|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC096590|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC110311|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase
mm9_v1_chrX_-_151582391_151582391	0.372134	HOX{A5,B5}.p2	BC100353|1700042B14Rik|73347|RIKEN cDNA 1700042B14 gene	NM_001081671|1700042B14Rik|73347|RIKEN cDNA 1700042B14 gene
mm9_v1_chr7_-_14840218_14840218	0.369865	HOX{A5,B5}.p2	BC147210|Sult2a6|629219|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6	BC172008|Sult2a6|629219|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6	NM_001081325|Sult2a6|629219|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6
mm9_v1_chr9_+_59526881_59526990	0.369584	HOX{A5,B5}.p2	AK187622|Pkm2|18746|pyruvate kinase, muscle	AK189986|Pkm2|18746|pyruvate kinase, muscle	AK191750|Pkm2|18746|pyruvate kinase, muscle	AK193178|Pkm2|18746|pyruvate kinase, muscle	AK194857|Pkm2|18746|pyruvate kinase, muscle	AK195839|Pkm2|18746|pyruvate kinase, muscle	AK196046|Pkm2|18746|pyruvate kinase, muscle	AK196682|Pkm2|18746|pyruvate kinase, muscle	AK198278|Pkm2|18746|pyruvate kinase, muscle	AK198346|Pkm2|18746|pyruvate kinase, muscle	AK198579|Pkm2|18746|pyruvate kinase, muscle	AK199500|Pkm2|18746|pyruvate kinase, muscle	AK200354|Pkm2|18746|pyruvate kinase, muscle	AK201799|Pkm2|18746|pyruvate kinase, muscle	AK204154|Pkm2|18746|pyruvate kinase, muscle	AK219384|Pkm2|18746|pyruvate kinase, muscle	AK197608|Pkm2|18746|pyruvate kinase, muscle
mm9_v1_chr5_+_34892224_34892336	0.3681	HOX{A5,B5}.p2	AK143548|Sh3bp2|24055|SH3-domain binding protein 2	NM_001145859|Sh3bp2|24055|SH3-domain binding protein 2	BC085497|Sh3bp2|24055|SH3-domain binding protein 2	NM_001136088|Sh3bp2|24055|SH3-domain binding protein 2
mm9_v1_chr10_-_33344405_33344571	0.367442	HOX{A5,B5}.p2	AK039308|Clvs2|215890|clavesin 2	NM_175448|Clvs2|215890|clavesin 2	BC058539|Clvs2|215890|clavesin 2	AK163214|Clvs2|215890|clavesin 2	AK053797|Clvs2|215890|clavesin 2	AK139868|Clvs2|215890|clavesin 2	AK139409|Clvs2|215890|clavesin 2	AK169009|Clvs2|215890|clavesin 2
mm9_v1_chr9_+_20385734_20385771	0.361556	HOX{A5,B5}.p2	NM_172919|Zfp846|244721|zinc finger protein 846
mm9_v1_chr4_-_61869471_61869486	0.359305	HOX{A5,B5}.p2	X89264|Zfp37|22696|zinc finger protein 37
mm9_v1_chr1_-_132612309_132612397	0.358712	HOX{A5,B5}.p2	X98847|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	BC051014|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	BC018418|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	AK146744|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	NM_008825|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm9_v1_chr4_-_134409149_134409155	0.358108	HOX{A5,B5}.p2	AK038972|Tmem57|66146|transmembrane protein 57	BC054769|Tmem57|66146|transmembrane protein 57
mm9_v1_chr5_-_146230556_146230591	0.351991	HOX{A5,B5}.p2	BC113143|Cyp3a16|13114|cytochrome P450, family 3, subfamily a, polypeptide 16	D26137|Cyp3a16|13114|cytochrome P450, family 3, subfamily a, polypeptide 16	NM_007820|Cyp3a16|13114|cytochrome P450, family 3, subfamily a, polypeptide 16
mm9_v1_chr11_-_82853975_82854034	0.349983	HOX{A5,B5}.p2	BC115828|Slfn10-ps|237887|schlafen 10, pseudogene	AY261803|Slfn10-ps|237887|schlafen 10, pseudogene	AK144698|Slfn10-ps|237887|schlafen 10, pseudogene	AY261802|Slfn10-ps|237887|schlafen 10, pseudogene	NM_181542|Slfn10-ps|237887|schlafen 10, pseudogene
mm9_v1_chr2_+_25356320_25356408	0.348642	HOX{A5,B5}.p2	AF176520|Fbxw5|30839|F-box and WD-40 domain protein 5	BC010776|Fbxw5|30839|F-box and WD-40 domain protein 5	AK154911|Fbxw5|30839|F-box and WD-40 domain protein 5
mm9_v1_chr7_+_134985435_134985552	0.347526	HOX{A5,B5}.p2	BC005791|Stx4a|20909|syntaxin 4A (placental)	U76832|Stx4a|20909|syntaxin 4A (placental)
mm9_v1_chr2_+_152579905_152579917	0.347017	HOX{A5,B5}.p2	AF271382|Cox4i2|84682|cytochrome c oxidase subunit IV isoform 2	NM_053091|Cox4i2|84682|cytochrome c oxidase subunit IV isoform 2
mm9_v1_chr5_-_129514313_129514509	0.346142	HOX{A5,B5}.p2	BC046279|Stx2|13852|syntaxin 2	AK165552|Stx2|13852|syntaxin 2	AK146462|Stx2|13852|syntaxin 2	AK167577|Stx2|13852|syntaxin 2	AK168067|Stx2|13852|syntaxin 2	NM_007941|Stx2|13852|syntaxin 2	D10475|Stx2|13852|syntaxin 2
mm9_v1_chr8_+_3493117_3493286	0.345952	HOX{A5,B5}.p2	AK155446|Zfp358|140482|zinc finger protein 358	NM_080461|Zfp358|140482|zinc finger protein 358	AF397208|Zfp358|140482|zinc finger protein 358
mm9_v1_chr2_-_80287349_80287399	0.342584	HOX{A5,B5}.p2	U88568|Frzb|20378|frizzled-related protein	BC016884|Frzb|20378|frizzled-related protein
mm9_v1_chr11_-_82804594_82804643	0.341489	HOX{A5,B5}.p2	AK050355|Slfn9|237886|schlafen 9
mm9_v1_chr12_+_105350933_105350933	0.338402	HOX{A5,B5}.p2	AK016702|Serpina3a|74069|serine (or cysteine) peptidase inhibitor, clade A, member 3A	BC063325|Serpina3a|74069|serine (or cysteine) peptidase inhibitor, clade A, member 3A	NM_001167705|Serpina3a|74069|serine (or cysteine) peptidase inhibitor, clade A, member 3A
mm9_v1_chr8_-_44662019_44662060	0.338347	HOX{A5,B5}.p2	AF167404|Adam26a|13525|a disintegrin and metallopeptidase domain 26A (testase 3)	AK015043|Adam26a|13525|a disintegrin and metallopeptidase domain 26A (testase 3)	AK029756|Adam26a|13525|a disintegrin and metallopeptidase domain 26A (testase 3)	NM_010085|Adam26a|13525|a disintegrin and metallopeptidase domain 26A (testase 3)
mm9_v1_chr9_+_118387748_118387788	0.337479	HOX{A5,B5}.p2	AK089817|Eomes|13813|eomesodermin homolog (Xenopus laevis)
mm9_v1_chr15_-_78374774_78374774	0.337241	HOX{A5,B5}.p2	AK136904|Sstr3|20607|somatostatin receptor 3	NM_009218|Sstr3|20607|somatostatin receptor 3
mm9_v1_chr11_+_113510808_113510853	0.33705	HOX{A5,B5}.p2	AK034636|Cog1|16834|component of oligomeric golgi complex 1	AK162971|Cog1|16834|component of oligomeric golgi complex 1	NM_013581|Cog1|16834|component of oligomeric golgi complex 1	AK159497|Cog1|16834|component of oligomeric golgi complex 1	AK171574|Cog1|16834|component of oligomeric golgi complex 1	AK152464|Cog1|16834|component of oligomeric golgi complex 1
mm9_v1_chr12_+_111903331_111903389	0.335699	HOX{A5,B5}.p2	AK151489|Dync1h1|13424|dynein cytoplasmic 1 heavy chain 1
mm9_v1_chr5_-_143289202_143289233	0.335268	HOX{A5,B5}.p2	Z21858|Tff1|21784|trefoil factor 1	AK008625|Tff1|21784|trefoil factor 1	AK008809|Tff1|21784|trefoil factor 1	AK010179|Tff1|21784|trefoil factor 1	AK160174|Tff1|21784|trefoil factor 1	BC117054|Tff1|21784|trefoil factor 1	BC117056|Tff1|21784|trefoil factor 1	AK008873|Tff1|21784|trefoil factor 1	AK131896|Tff1|21784|trefoil factor 1	NM_009362|Tff1|21784|trefoil factor 1
mm9_v1_chrX_-_96086314_96086363	0.335034	HOX{A5,B5}.p2	AK031419|Ophn1|94190|oligophrenin 1	AK036038|Ophn1|94190|oligophrenin 1	AK043239|Ophn1|94190|oligophrenin 1	AK048153|Ophn1|94190|oligophrenin 1	AK166392|Ophn1|94190|oligophrenin 1	NM_052976|Ophn1|94190|oligophrenin 1	AK039304|Ophn1|94190|oligophrenin 1
mm9_v1_chr2_+_136717938_136718024	0.332734	HOX{A5,B5}.p2	AK050487|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene	AK008687|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene	NM_028834|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene	BC071202|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene
mm9_v1_chr1_-_158135155_158135155	0.330706	HOX{A5,B5}.p2	AK039197|Fam163a|329274|family with sequence similarity 163, member A	NM_177838|Fam163a|329274|family with sequence similarity 163, member A
mm9_v1_chr10_+_82329370_82329405	0.330181	HOX{A5,B5}.p2	AK161275|Eid3|66341|EP300 interacting inhibitor of differentiation 3	AK161307|Eid3|66341|EP300 interacting inhibitor of differentiation 3	NM_025499|Eid3|66341|EP300 interacting inhibitor of differentiation 3	AK007194|Eid3|66341|EP300 interacting inhibitor of differentiation 3	AK006438|Eid3|66341|EP300 interacting inhibitor of differentiation 3	BC099545|Eid3|66341|EP300 interacting inhibitor of differentiation 3	AK132745|Eid3|66341|EP300 interacting inhibitor of differentiation 3
mm9_v1_chr17_-_48590807_48590825	0.328636	HOX{A5,B5}.p2	AK162634|Tspo2|70026|translocator protein 2	AK011003|Tspo2|70026|translocator protein 2	NM_027292|Tspo2|70026|translocator protein 2
mm9_v1_chr5_-_27827931_27827977	0.32801	HOX{A5,B5}.p2	BC119075|Speer4b|73526|spermatogenesis associated glutamate (E)-rich protein 4b	NM_028561|Speer4b|73526|spermatogenesis associated glutamate (E)-rich protein 4b	AK006975|Speer4b|73526|spermatogenesis associated glutamate (E)-rich protein 4b
mm9_v1_chr13_-_64254466_64254592	0.325399	HOX{A5,B5}.p2	BC119531|Zfp367|238673|zinc finger protein 367	BC119532|Zfp367|238673|zinc finger protein 367	AK033288|Zfp367|238673|zinc finger protein 367	NM_175494|Zfp367|238673|zinc finger protein 367	AK041331|Zfp367|238673|zinc finger protein 367	AK041361|Zfp367|238673|zinc finger protein 367	AK077686|Zfp367|238673|zinc finger protein 367
mm9_v1_chrX_+_138662725_138662809	0.32502	HOX{A5,B5}.p2	NM_172782|Nxt2|237082|nuclear transport factor 2-like export factor 2	AK144349|Nxt2|237082|nuclear transport factor 2-like export factor 2	BC064727|Nxt2|237082|nuclear transport factor 2-like export factor 2	AK032102|Nxt2|237082|nuclear transport factor 2-like export factor 2	BC068166|Nxt2|237082|nuclear transport factor 2-like export factor 2	BC118503|Nxt2|237082|nuclear transport factor 2-like export factor 2	BC094570|Nxt2|237082|nuclear transport factor 2-like export factor 2
mm9_v1_chr12_-_85183292_85183292	0.323988	HOX{A5,B5}.p2	AF169191|Numb|18222|numb gene homolog (Drosophila)	AF169192|Numb|18222|numb gene homolog (Drosophila)	AF170709|Numb|18222|numb gene homolog (Drosophila)	NM_001136075|Numb|18222|numb gene homolog (Drosophila)	NM_010949|Numb|18222|numb gene homolog (Drosophila)
mm9_v1_chr7_+_139158135_139158148	0.323988	HOX{A5,B5}.p2	AK036100|Gpr26|233919|G protein-coupled receptor 26	NM_173410|Gpr26|233919|G protein-coupled receptor 26
mm9_v1_chr13_+_54287497_54287501	0.32391	HOX{A5,B5}.p2	AK020259|Hrh2|15466|histamine receptor H2	NM_001010973|Hrh2|15466|histamine receptor H2	NM_008286|Hrh2|15466|histamine receptor H2	AK163760|Hrh2|15466|histamine receptor H2
mm9_v1_chr3_-_94276817_94276835	0.322987	HOX{A5,B5}.p2	AK019569|Riiad1|66353|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
mm9_v1_chr14_-_70828844_70828916	0.322273	HOX{A5,B5}.p2	AK030116|Piwil2|57746|piwi-like homolog 2 (Drosophila)	BC138444|Piwil2|57746|piwi-like homolog 2 (Drosophila)	BC145717|Piwil2|57746|piwi-like homolog 2 (Drosophila)	AB032605|Piwil2|57746|piwi-like homolog 2 (Drosophila)	NM_021308|Piwil2|57746|piwi-like homolog 2 (Drosophila)
mm9_v1_chr4_+_43575487_43575594	0.321506	HOX{A5,B5}.p2	AK132785|Creb3|12913|cAMP responsive element binding protein 3	AK144208|Creb3|12913|cAMP responsive element binding protein 3	NM_013497|Creb3|12913|cAMP responsive element binding protein 3	AK090077|Creb3|12913|cAMP responsive element binding protein 3	BC002094|Creb3|12913|cAMP responsive element binding protein 3
mm9_v1_chr2_+_31951149_31951239	0.321471	HOX{A5,B5}.p2	AK052883|Ppapdc3|227721|phosphatidic acid phosphatase type 2 domain containing 3	NM_145521|Ppapdc3|227721|phosphatidic acid phosphatase type 2 domain containing 3	BC016136|Ppapdc3|227721|phosphatidic acid phosphatase type 2 domain containing 3
mm9_v1_chr9_+_14080744_14080778	0.320548	HOX{A5,B5}.p2	AK155398|Sesn3|75747|sestrin 3	NM_030261|Sesn3|75747|sestrin 3
mm9_v1_chr2_+_152253202_152253368	0.320477	HOX{A5,B5}.p2	BC144945|6820408C15Rik|228778|RIKEN cDNA 6820408C15 gene	BC137826|6820408C15Rik|228778|RIKEN cDNA 6820408C15 gene	BC144943|6820408C15Rik|228778|RIKEN cDNA 6820408C15 gene	BC144944|6820408C15Rik|228778|RIKEN cDNA 6820408C15 gene
mm9_v1_chr2_-_180444687_180444716	0.320206	HOX{A5,B5}.p2	BC096662|Dido1|23856|death inducer-obliterator 1	AK129117|Dido1|23856|death inducer-obliterator 1	BC060249|Dido1|23856|death inducer-obliterator 1	NM_177852|Dido1|23856|death inducer-obliterator 1
mm9_v1_chr11_-_94183188_94183309	0.313634	HOX{A5,B5}.p2	AK014362|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	BC009092|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	NM_026313|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	AK078090|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	AK151228|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	AK151839|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	AK019464|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)
mm9_v1_chr17_-_15700264_15700286	0.313081	HOX{A5,B5}.p2	FJ212287|Prdm9|213389|PR domain containing 9	NM_144809|Prdm9|213389|PR domain containing 9
mm9_v1_chr5_-_146617411_146617451	0.304557	HOX{A5,B5}.p2	BC125522|Cyp3a44|337924|cytochrome P450, family 3, subfamily a, polypeptide 44	AB039380|Cyp3a44|337924|cytochrome P450, family 3, subfamily a, polypeptide 44	NM_177380|Cyp3a44|337924|cytochrome P450, family 3, subfamily a, polypeptide 44
mm9_v1_chr4_-_133742915_133743027	0.30334	HOX{A5,B5}.p2	AK085545|Ccdc21|70012|coiled-coil domain containing 21	BC008221|Ccdc21|70012|coiled-coil domain containing 21	AK030742|Ccdc21|70012|coiled-coil domain containing 21	AK141103|Ccdc21|70012|coiled-coil domain containing 21	AK010621|Ccdc21|70012|coiled-coil domain containing 21	NM_144527|Ccdc21|70012|coiled-coil domain containing 21
mm9_v1_chr6_+_5340417_5340708	0.301992	HOX{A5,B5}.p2	AK132068|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK018373|Asb4|65255|ankyrin repeat and SOCS box-containing 4	BC054745|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK076004|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AF155355|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK133894|Asb4|65255|ankyrin repeat and SOCS box-containing 4
mm9_v1_chr15_-_79359998_79360114	0.30164	HOX{A5,B5}.p2	AK079294|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK011338|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK079442|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK164451|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
mm9_v1_chr5_+_75471625_75471626	0.299727	HOX{A5,B5}.p2	NM_133256|Gsx2|14843|GS homeobox 2	S79041|Gsx2|14843|GS homeobox 2	BC119464|Gsx2|14843|GS homeobox 2	BC119465|Gsx2|14843|GS homeobox 2
mm9_v1_chr11_-_100644485_100644492	0.297177	HOX{A5,B5}.p2	AK004071|Stat5b|20851|signal transducer and activator of transcription 5B
mm9_v1_chr7_+_51720804_51720838	0.288383	HOX{A5,B5}.p2	AK002587|Aspdh|68352|aspartate dehydrogenase domain containing	NM_026690|Aspdh|68352|aspartate dehydrogenase domain containing	BC019451|Aspdh|68352|aspartate dehydrogenase domain containing
mm9_v1_chr5_-_121641282_121641449	0.287606	HOX{A5,B5}.p2	D84372|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC057398|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC028513|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK011468|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK147354|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC059278|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK159501|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK159587|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	NM_001109992|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	NM_011202|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11
mm9_v1_chr11_+_79967561_79967663	0.281236	HOX{A5,B5}.p2	AK050079|Adap2|216991|ArfGAP with dual PH domains 2	AK139005|Adap2|216991|ArfGAP with dual PH domains 2	AK050398|Adap2|216991|ArfGAP with dual PH domains 2	AK053152|Adap2|216991|ArfGAP with dual PH domains 2	AK140864|Adap2|216991|ArfGAP with dual PH domains 2	BC027165|Adap2|216991|ArfGAP with dual PH domains 2	NM_172133|Adap2|216991|ArfGAP with dual PH domains 2
mm9_v1_chr13_+_67295437_67295470	0.279232	HOX{A5,B5}.p2	NM_001048204|Zfp455|218311|zinc finger protein 455	AK028336|Zfp455|218311|zinc finger protein 455
mm9_v1_chr6_-_83522410_83522497	0.272358	HOX{A5,B5}.p2	AK136961|Stambp|70527|STAM binding protein	AK220541|Stambp|70527|STAM binding protein	BC006939|Stambp|70527|STAM binding protein	BC003497|Stambp|70527|STAM binding protein	BC025111|Stambp|70527|STAM binding protein	AB010123|Stambp|70527|STAM binding protein	AK019907|Stambp|70527|STAM binding protein	AK046995|Stambp|70527|STAM binding protein	AK017600|Stambp|70527|STAM binding protein	AK168810|Stambp|70527|STAM binding protein	AK139391|Stambp|70527|STAM binding protein	NM_024239|Stambp|70527|STAM binding protein
mm9_v1_chr17_+_8627287_8627315	0.266859	HOX{A5,B5}.p2	NM_009309|T|20997|brachyury	X51683|T|20997|brachyury	BC120807|T|20997|brachyury
mm9_v1_chrX_+_150266835_150266835	0.265036	HOX{A5,B5}.p2	BC068162|Spin2|278240|spindlin family, member 2	NM_001005370|Spin2|278240|spindlin family, member 2
mm9_v1_chr10_+_81096440_81096463	0.264597	HOX{A5,B5}.p2	AK043638|Ankrd24|70615|ankyrin repeat domain 24	AK173316|Ankrd24|70615|ankyrin repeat domain 24
mm9_v1_chr7_+_52673715_52673724	0.261655	HOX{A5,B5}.p2	
mm9_v1_chr4_+_40419212_40419212	0.26164	HOX{A5,B5}.p2	AK044217|Tmem215|320500|transmembrane protein 215	AK044627|Tmem215|320500|transmembrane protein 215	NM_177175|Tmem215|320500|transmembrane protein 215
mm9_v1_chr17_-_37088436_37088450	0.260389	HOX{A5,B5}.p2	EF528576|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm9_v1_chr11_+_17157549_17157664	0.259042	HOX{A5,B5}.p2	X95591|C1d|57316|C1D nuclear receptor co-repressor	AK028702|C1d|57316|C1D nuclear receptor co-repressor	AK035169|C1d|57316|C1D nuclear receptor co-repressor	NM_020558|C1d|57316|C1D nuclear receptor co-repressor	BC005436|C1d|57316|C1D nuclear receptor co-repressor
mm9_v1_chr11_+_21472279_21472320	0.258129	HOX{A5,B5}.p2	AK083042|Wdpcp|216560|WD repeat containing planar cell polarity effector	NM_145425|Wdpcp|216560|WD repeat containing planar cell polarity effector	AK082370|Wdpcp|216560|WD repeat containing planar cell polarity effector	AK043672|Wdpcp|216560|WD repeat containing planar cell polarity effector	BC141166|Wdpcp|216560|WD repeat containing planar cell polarity effector	AF424701|Wdpcp|216560|WD repeat containing planar cell polarity effector
mm9_v1_chr11_-_69431369_69431406	0.25098	HOX{A5,B5}.p2	U85644|Shbg|20415|sex hormone binding globulin	BC120785|Shbg|20415|sex hormone binding globulin	BC120787|Shbg|20415|sex hormone binding globulin	AK010959|Shbg|20415|sex hormone binding globulin	NM_011367|Shbg|20415|sex hormone binding globulin
mm9_v1_chr5_-_73259656_73259754	0.250976	HOX{A5,B5}.p2	BC037071|Tec|21682|tec protein tyrosine kinase	AK139329|Tec|21682|tec protein tyrosine kinase	AK154457|Tec|21682|tec protein tyrosine kinase	AK168452|Tec|21682|tec protein tyrosine kinase	AK168460|Tec|21682|tec protein tyrosine kinase	AK170588|Tec|21682|tec protein tyrosine kinase	AK133418|Tec|21682|tec protein tyrosine kinase	NM_001113460|Tec|21682|tec protein tyrosine kinase	NM_001113461|Tec|21682|tec protein tyrosine kinase	NM_001113464|Tec|21682|tec protein tyrosine kinase	S53716|Tec|21682|tec protein tyrosine kinase	X55663|Tec|21682|tec protein tyrosine kinase
mm9_v1_chr4_-_144905040_144905066	0.248609	HOX{A5,B5}.p2	BC130026|Tnfrsf8|21941|tumor necrosis factor receptor superfamily, member 8	NM_009401|Tnfrsf8|21941|tumor necrosis factor receptor superfamily, member 8	U25416|Tnfrsf8|21941|tumor necrosis factor receptor superfamily, member 8	AK044269|Tnfrsf8|21941|tumor necrosis factor receptor superfamily, member 8	AK044614|Tnfrsf8|21941|tumor necrosis factor receptor superfamily, member 8
mm9_v1_chr6_+_136467315_136467378	0.244879	HOX{A5,B5}.p2	AK082697|Atf7ip|54343|activating transcription factor 7 interacting protein	AK167542|Atf7ip|54343|activating transcription factor 7 interacting protein	BC048827|Atf7ip|54343|activating transcription factor 7 interacting protein	AK134252|Atf7ip|54343|activating transcription factor 7 interacting protein	BC052460|Atf7ip|54343|activating transcription factor 7 interacting protein	NM_019426|Atf7ip|54343|activating transcription factor 7 interacting protein	AJ132702|Atf7ip|54343|activating transcription factor 7 interacting protein	BC022714|Atf7ip|54343|activating transcription factor 7 interacting protein
mm9_v1_chr15_-_36094462_36094638	0.243037	HOX{A5,B5}.p2	AK030012|Fbxo43|78803|F-box protein 43	AK019714|Fbxo43|78803|F-box protein 43	BC098484|Fbxo43|78803|F-box protein 43	NM_001081253|Fbxo43|78803|F-box protein 43
mm9_v1_chr7_+_19511230_19511244	0.243031	HOX{A5,B5}.p2	NM_001029877|Nova2|384569|neuro-oncological ventral antigen 2
mm9_v1_chr14_-_52924792_52924800	0.241167	HOX{A5,B5}.p2	AK035061|Mettl3|56335|methyltransferase like 3	NM_019721|Mettl3|56335|methyltransferase like 3
mm9_v1_chr6_+_136467388_136467391	0.23946	HOX{A5,B5}.p2	BC060246|Atf7ip|54343|activating transcription factor 7 interacting protein
mm9_v1_chr15_-_79723549_79723567	0.23723	HOX{A5,B5}.p2	AK143849|D730005E14Rik|109361|RIKEN cDNA D730005E14 gene	AK035732|D730005E14Rik|109361|RIKEN cDNA D730005E14 gene
mm9_v1_chr17_+_12571455_12571482	0.235563	HOX{A5,B5}.p2	BC014773|Plg|18815|plasminogen	NM_008877|Plg|18815|plasminogen
mm9_v1_chr5_-_26415803_26415803	0.232995	HOX{A5,B5}.p2	NM_001177579|Gm10471|100039045|predicted gene 10471
mm9_v1_chr6_-_92431385_92431385	0.232972	HOX{A5,B5}.p2	AK020123|Prickle2|243548|prickle homolog 2 (Drosophila)	AK032631|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134460|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr1_-_129998984_129999039	0.232424	HOX{A5,B5}.p2	BC066035|Zranb3|226409|zinc finger, RAN-binding domain containing 3	NM_027678|Zranb3|226409|zinc finger, RAN-binding domain containing 3	AK042139|Zranb3|226409|zinc finger, RAN-binding domain containing 3	AK083641|Zranb3|226409|zinc finger, RAN-binding domain containing 3	AK084943|Zranb3|226409|zinc finger, RAN-binding domain containing 3	AK085488|Zranb3|226409|zinc finger, RAN-binding domain containing 3
mm9_v1_chr14_-_56364390_56364415	0.231529	HOX{A5,B5}.p2	AK003958|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1
mm9_v1_chr5_+_89956453_89956453	0.229795	HOX{A5,B5}.p2	AK050939|Npffr2|104443|neuropeptide FF receptor 2	NM_133192|Npffr2|104443|neuropeptide FF receptor 2
mm9_v1_chr19_-_45857958_45858012	0.229514	HOX{A5,B5}.p2	AK129188|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)
mm9_v1_chr16_-_91728816_91728882	0.224793	HOX{A5,B5}.p2	BC019387|Cryzl1|66609|crystallin, zeta (quinone reductase)-like 1	AK008846|Cryzl1|66609|crystallin, zeta (quinone reductase)-like 1	BC010479|Cryzl1|66609|crystallin, zeta (quinone reductase)-like 1	NM_133679|Cryzl1|66609|crystallin, zeta (quinone reductase)-like 1	AK010433|Cryzl1|66609|crystallin, zeta (quinone reductase)-like 1	AK145827|Cryzl1|66609|crystallin, zeta (quinone reductase)-like 1
mm9_v1_chr7_-_140900737_140900782	0.223063	HOX{A5,B5}.p2	AK145902|Uros|22276|uroporphyrinogen III synthase	AK164297|Uros|22276|uroporphyrinogen III synthase	U18867|Uros|22276|uroporphyrinogen III synthase	AK002971|Uros|22276|uroporphyrinogen III synthase	BC068161|Uros|22276|uroporphyrinogen III synthase	AK135314|Uros|22276|uroporphyrinogen III synthase
mm9_v1_chr2_-_164419070_164419093	0.222021	HOX{A5,B5}.p2	AK006296|Spinlw1|75526|serine protease inhibitor-like, with Kunitz and WAP domains 1 (eppin)	NM_029325|Spinlw1|75526|serine protease inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF346413|Spinlw1|75526|serine protease inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC048637|Spinlw1|75526|serine protease inhibitor-like, with Kunitz and WAP domains 1 (eppin)
mm9_v1_chr19_-_15999377_15999548	0.216547	HOX{A5,B5}.p2	AK035361|Psat1|107272|phosphoserine aminotransferase 1	AK162609|Psat1|107272|phosphoserine aminotransferase 1	AK167029|Psat1|107272|phosphoserine aminotransferase 1	AF259674|Psat1|107272|phosphoserine aminotransferase 1	AK145216|Psat1|107272|phosphoserine aminotransferase 1	AK168098|Psat1|107272|phosphoserine aminotransferase 1	AK169370|Psat1|107272|phosphoserine aminotransferase 1	AK145672|Psat1|107272|phosphoserine aminotransferase 1	AK166880|Psat1|107272|phosphoserine aminotransferase 1	AK090108|Psat1|107272|phosphoserine aminotransferase 1	AK049855|Psat1|107272|phosphoserine aminotransferase 1	AK168216|Psat1|107272|phosphoserine aminotransferase 1	AK167044|Psat1|107272|phosphoserine aminotransferase 1	BC004827|Psat1|107272|phosphoserine aminotransferase 1	NM_177420|Psat1|107272|phosphoserine aminotransferase 1	AK032487|Psat1|107272|phosphoserine aminotransferase 1
mm9_v1_chr9_-_100407241_100407274	0.216207	HOX{A5,B5}.p2	AK053155|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1	AK054051|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1
mm9_v1_chr17_-_22302941_22302943	0.215872	HOX{A5,B5}.p2	AK032784|Zfp947|210853|zinc finger protein 947	NM_177596|Zfp947|210853|zinc finger protein 947
mm9_v1_chr14_+_67254087_67254180	0.214905	HOX{A5,B5}.p2	AK085653|Adra1a|11549|adrenergic receptor, alpha 1a	AK079597|Adra1a|11549|adrenergic receptor, alpha 1a	NM_013461|Adra1a|11549|adrenergic receptor, alpha 1a	AK050183|Adra1a|11549|adrenergic receptor, alpha 1a	AK042759|Adra1a|11549|adrenergic receptor, alpha 1a	AK138919|Adra1a|11549|adrenergic receptor, alpha 1a
mm9_v1_chr2_-_130912024_130912099	0.214572	HOX{A5,B5}.p2	BC141336|Siglec1|20612|sialic acid binding Ig-like lectin 1, sialoadhesin	BC141335|Siglec1|20612|sialic acid binding Ig-like lectin 1, sialoadhesin
mm9_v1_chr17_+_56906984_56907028	0.213342	HOX{A5,B5}.p2	BC023942|Dus3l|224907|dihydrouridine synthase 3-like (S. cerevisiae)
mm9_v1_chr7_+_138697575_138697575	0.213224	HOX{A5,B5}.p2	AK138228|Hmx2|15372|H6 homeobox 2	NM_145998|Hmx2|15372|H6 homeobox 2
mm9_v1_chr13_+_90229271_90229367	0.21313	HOX{A5,B5}.p2	NM_025335|Tmem167|66074|transmembrane protein 167	AK021263|Tmem167|66074|transmembrane protein 167	AK032474|Tmem167|66074|transmembrane protein 167	AK161037|Tmem167|66074|transmembrane protein 167	AK031706|Tmem167|66074|transmembrane protein 167	AK007966|Tmem167|66074|transmembrane protein 167	AK019962|Tmem167|66074|transmembrane protein 167	AK016036|Tmem167|66074|transmembrane protein 167	AK012161|Tmem167|66074|transmembrane protein 167	AK002884|Tmem167|66074|transmembrane protein 167	AK088895|Tmem167|66074|transmembrane protein 167	AK160704|Tmem167|66074|transmembrane protein 167	AK007771|Tmem167|66074|transmembrane protein 167	AK132361|Tmem167|66074|transmembrane protein 167	BC085489|Tmem167|66074|transmembrane protein 167
mm9_v1_chr4_-_119211373_119211373	0.205577	HOX{A5,B5}.p2	BC076608|AA415398|433752|expressed sequence AA415398	NM_001004178|AA415398|433752|expressed sequence AA415398
mm9_v1_chr14_-_52924739_52924784	0.20473	HOX{A5,B5}.p2	AK089158|Mettl3|56335|methyltransferase like 3	AF135789|Mettl3|56335|methyltransferase like 3	BC012526|Mettl3|56335|methyltransferase like 3	AK085189|Mettl3|56335|methyltransferase like 3	AK151616|Mettl3|56335|methyltransferase like 3	AK153113|Mettl3|56335|methyltransferase like 3
mm9_v1_chr4_+_138433841_138433860	0.20437	HOX{A5,B5}.p2	AK148187|Pla2g2e|26970|phospholipase A2, group IIE	AF112984|Pla2g2e|26970|phospholipase A2, group IIE	NM_012044|Pla2g2e|26970|phospholipase A2, group IIE	AF166098|Pla2g2e|26970|phospholipase A2, group IIE
mm9_v1_chr19_-_55291933_55291946	0.202067	HOX{A5,B5}.p2	AK049940|Gucy2g|73707|guanylate cyclase 2g
mm9_v1_chr9_-_114549261_114549332	0.201965	HOX{A5,B5}.p2	BC036179|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	BC039183|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK171701|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK161842|Cnot10|78893|CCR4-NOT transcription complex, subunit 10
mm9_v1_chr1_-_98894136_98894144	0.201952	HOX{A5,B5}.p2	NM_001039475|Slco6b1|67854|solute carrier organic anion transporter family, member 6b1	AK016463|Slco6b1|67854|solute carrier organic anion transporter family, member 6b1	AY461596|Slco6b1|67854|solute carrier organic anion transporter family, member 6b1
mm9_v1_chr7_+_148048854_148048984	0.20073	HOX{A5,B5}.p2	
mm9_v1_chr4_+_45861687_45861850	0.197885	HOX{A5,B5}.p2	AK045033|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene	NM_028788|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene	AK050152|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene	AK050348|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene	AK004855|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene
mm9_v1_chr17_-_25482323_25482506	0.19523	HOX{A5,B5}.p2	U42405|Tpsab1|17230|tryptase alpha/beta 1	L00653|Tpsab1|17230|tryptase alpha/beta 1	BC011328|Tpsab1|17230|tryptase alpha/beta 1	AK040500|Tpsab1|17230|tryptase alpha/beta 1	NM_031187|Tpsab1|17230|tryptase alpha/beta 1
mm9_v1_chr17_+_31038757_31038830	0.194703	HOX{A5,B5}.p2	BC139464|Glp1r|14652|glucagon-like peptide 1 receptor	BC139466|Glp1r|14652|glucagon-like peptide 1 receptor	BC145626|Glp1r|14652|glucagon-like peptide 1 receptor	DQ093397|Glp1r|14652|glucagon-like peptide 1 receptor	DQ093398|Glp1r|14652|glucagon-like peptide 1 receptor	NM_021332|Glp1r|14652|glucagon-like peptide 1 receptor	AJ001692|Glp1r|14652|glucagon-like peptide 1 receptor	BC103624|Glp1r|14652|glucagon-like peptide 1 receptor	BC105649|Glp1r|14652|glucagon-like peptide 1 receptor	BC105650|Glp1r|14652|glucagon-like peptide 1 receptor	AY293742|Glp1r|14652|glucagon-like peptide 1 receptor
mm9_v1_chr7_+_88006993_88006993	0.191505	HOX{A5,B5}.p2	BC046961|Zscan2|22691|zinc finger and SCAN domain containing 2	NM_009553|Zscan2|22691|zinc finger and SCAN domain containing 2
mm9_v1_chr2_-_80287781_80287882	0.18778	HOX{A5,B5}.p2	U91905|Frzb|20378|frizzled-related protein
mm9_v1_chr18_-_35899651_35899795	0.187626	HOX{A5,B5}.p2	AK172314|Tmem173|72512|transmembrane protein 173
mm9_v1_chr5_-_77640458_77640477	0.186551	HOX{A5,B5}.p2	BC087876|Spink2|69982|serine peptidase inhibitor, Kazal type 2	BC048619|Spink2|69982|serine peptidase inhibitor, Kazal type 2	AK005709|Spink2|69982|serine peptidase inhibitor, Kazal type 2	NM_183284|Spink2|69982|serine peptidase inhibitor, Kazal type 2
mm9_v1_chr6_+_127022919_127023047	0.185165	HOX{A5,B5}.p2	AK155687|Fgf23|64654|fibroblast growth factor 23	NM_022657|Fgf23|64654|fibroblast growth factor 23	AF263536|Fgf23|64654|fibroblast growth factor 23	BC120605|Fgf23|64654|fibroblast growth factor 23	AB037889|Fgf23|64654|fibroblast growth factor 23
mm9_v1_chr6_+_128313041_128313108	0.184076	HOX{A5,B5}.p2	AK041638|Foxm1|14235|forkhead box M1	AK049177|Foxm1|14235|forkhead box M1	Y11245|Foxm1|14235|forkhead box M1
mm9_v1_chr2_-_66094647_66094696	0.182528	HOX{A5,B5}.p2	BC151199|Ttc21b|73668|tetratricopeptide repeat domain 21B	BC172115|Ttc21b|73668|tetratricopeptide repeat domain 21B	DQ011164|Ttc21b|73668|tetratricopeptide repeat domain 21B	NM_001047604|Ttc21b|73668|tetratricopeptide repeat domain 21B
mm9_v1_chr11_-_21471829_21471936	0.178865	HOX{A5,B5}.p2	AK005237|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	NM_008618|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)
mm9_v1_chr16_-_44333103_44333308	0.178797	HOX{A5,B5}.p2	AK171920|Sidt1|320007|SID1 transmembrane family, member 1	AK172408|Sidt1|320007|SID1 transmembrane family, member 1	AK171897|Sidt1|320007|SID1 transmembrane family, member 1	AK047199|Sidt1|320007|SID1 transmembrane family, member 1	AK046836|Sidt1|320007|SID1 transmembrane family, member 1
mm9_v1_chrX_-_54646073_54646213	0.178476	HOX{A5,B5}.p2	AK207357|Rbmx|19655|RNA binding motif protein, X chromosome	AJ237846|Rbmx|19655|RNA binding motif protein, X chromosome	AJ237847|Rbmx|19655|RNA binding motif protein, X chromosome	AK165006|Rbmx|19655|RNA binding motif protein, X chromosome	BC003710|Rbmx|19655|RNA binding motif protein, X chromosome	AK083899|Rbmx|19655|RNA binding motif protein, X chromosome	AK135164|Rbmx|19655|RNA binding motif protein, X chromosome	NM_001166623|Rbmx|19655|RNA binding motif protein, X chromosome	NM_011252|Rbmx|19655|RNA binding motif protein, X chromosome
mm9_v1_chr2_-_120114770_120114804	0.17741	HOX{A5,B5}.p2	AK167492|Pla2g4d|78390|phospholipase A2, group IVD	BC113160|Pla2g4d|78390|phospholipase A2, group IVD	BC113770|Pla2g4d|78390|phospholipase A2, group IVD	AB195276|Pla2g4d|78390|phospholipase A2, group IVD	AK145985|Pla2g4d|78390|phospholipase A2, group IVD	NM_001024137|Pla2g4d|78390|phospholipase A2, group IVD
mm9_v1_chr1_+_193542261_193542399	0.176492	HOX{A5,B5}.p2	NM_001134829|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1	AK172914|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1	BC013667|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1
mm9_v1_chr8_-_4105727_4105834	0.173216	HOX{A5,B5}.p2	BC038121|Cd209f|69142|CD209f antigen	BC052782|Cd209f|69142|CD209f antigen	BC099497|Cd209f|69142|CD209f antigen	AK007638|Cd209f|69142|CD209f antigen	NM_026956|Cd209f|69142|CD209f antigen	BC021323|Cd209f|69142|CD209f antigen
mm9_v1_chr11_-_42134509_42134538	0.172781	HOX{A5,B5}.p2	X51986|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
mm9_v1_chr9_-_119603442_119603477	0.172223	HOX{A5,B5}.p2	AY538273|Scn10a|20264|sodium channel, voltage-gated, type X, alpha	NM_009134|Scn10a|20264|sodium channel, voltage-gated, type X, alpha	Y09108|Scn10a|20264|sodium channel, voltage-gated, type X, alpha
mm9_v1_chr17_-_37088578_37088736	0.168867	HOX{A5,B5}.p2	BC027737|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK077455|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK089107|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK162607|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK170104|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK005379|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	NM_029632|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm9_v1_chr16_+_48816968_48817099	0.163423	HOX{A5,B5}.p2	AF290871|Retnlb|57263|resistin like beta	NM_023881|Retnlb|57263|resistin like beta	AK020240|Retnlb|57263|resistin like beta	AF323083|Retnlb|57263|resistin like beta	BC022650|Retnlb|57263|resistin like beta
mm9_v1_chr7_+_51024469_51024469	0.162725	HOX{A5,B5}.p2	BC147442|Klk12|69511|kallikrein related-peptidase 12	BC147463|Klk12|69511|kallikrein related-peptidase 12	NM_027097|Klk12|69511|kallikrein related-peptidase 12
mm9_v1_chr2_-_155652383_155652474	0.161552	HOX{A5,B5}.p2	BC024442|Eif6|16418|eukaryotic translation initiation factor 6	AK018313|Eif6|16418|eukaryotic translation initiation factor 6	AF047046|Eif6|16418|eukaryotic translation initiation factor 6	AK151559|Eif6|16418|eukaryotic translation initiation factor 6	AK167422|Eif6|16418|eukaryotic translation initiation factor 6	AK003447|Eif6|16418|eukaryotic translation initiation factor 6	AK151102|Eif6|16418|eukaryotic translation initiation factor 6	AK152093|Eif6|16418|eukaryotic translation initiation factor 6	AK152215|Eif6|16418|eukaryotic translation initiation factor 6	AK152832|Eif6|16418|eukaryotic translation initiation factor 6	AK159157|Eif6|16418|eukaryotic translation initiation factor 6	AK012218|Eif6|16418|eukaryotic translation initiation factor 6	AK088707|Eif6|16418|eukaryotic translation initiation factor 6	AK005384|Eif6|16418|eukaryotic translation initiation factor 6	AK007594|Eif6|16418|eukaryotic translation initiation factor 6	AK134364|Eif6|16418|eukaryotic translation initiation factor 6	AK150720|Eif6|16418|eukaryotic translation initiation factor 6	AK150400|Eif6|16418|eukaryotic translation initiation factor 6	AK150931|Eif6|16418|eukaryotic translation initiation factor 6	AK151089|Eif6|16418|eukaryotic translation initiation factor 6	AK151644|Eif6|16418|eukaryotic translation initiation factor 6	AK168257|Eif6|16418|eukaryotic translation initiation factor 6	AK152416|Eif6|16418|eukaryotic translation initiation factor 6	AF108462|Eif6|16418|eukaryotic translation initiation factor 6
mm9_v1_chr5_-_73647856_73647874	0.159206	HOX{A5,B5}.p2	AK164590|Fryl|72313|furry homolog-like (Drosophila)	NM_028194|Fryl|72313|furry homolog-like (Drosophila)
mm9_v1_chr7_-_105268002_105268002	0.158579	HOX{A5,B5}.p2	NM_008663|Myo7a|17921|myosin VIIA
mm9_v1_chr6_-_41396095_41396143	0.158033	HOX{A5,B5}.p2	NM_001103153|Gm10334|100040233|predicted gene 10334	BC141304|Prss3|22073|protease, serine, 3
mm9_v1_chr7_-_133940879_133940922	0.156311	HOX{A5,B5}.p2	X03797|Aldoa|11674|aldolase A, fructose-bisphosphate
mm9_v1_chr1_+_58267240_58267313	0.152557	HOX{A5,B5}.p2	AK158427|Aox4|71872|aldehyde oxidase 4	NM_023631|Aox4|71872|aldehyde oxidase 4	AK160953|Aox4|71872|aldehyde oxidase 4	AK081746|Aox4|71872|aldehyde oxidase 4	AF233581|Aox4|71872|aldehyde oxidase 4	BC117975|Aox4|71872|aldehyde oxidase 4	BC117976|Aox4|71872|aldehyde oxidase 4
mm9_v1_chr18_+_31919477_31919481	0.147691	HOX{A5,B5}.p2	AK151060|Ammecr1l|225339|AMME chromosomal region gene 1-like	AK054131|Ammecr1l|225339|AMME chromosomal region gene 1-like
mm9_v1_chr2_+_119151519_119151564	0.147461	HOX{A5,B5}.p2	AK052322|Dll4|54485|delta-like 4 (Drosophila)	NM_019454|Dll4|54485|delta-like 4 (Drosophila)	AK004739|Dll4|54485|delta-like 4 (Drosophila)	AK031699|Dll4|54485|delta-like 4 (Drosophila)	AK165517|Dll4|54485|delta-like 4 (Drosophila)	AK171717|Dll4|54485|delta-like 4 (Drosophila)	BC049130|Dll4|54485|delta-like 4 (Drosophila)	AF253469|Dll4|54485|delta-like 4 (Drosophila)	BC042497|Dll4|54485|delta-like 4 (Drosophila)
mm9_v1_chr19_+_44567961_44568029	0.147348	HOX{A5,B5}.p2	AK050992|Wnt8b|22423|wingless related MMTV integration site 8b	NM_011720|Wnt8b|22423|wingless related MMTV integration site 8b	AF130349|Wnt8b|22423|wingless related MMTV integration site 8b	BC119544|Wnt8b|22423|wingless related MMTV integration site 8b
mm9_v1_chr14_+_25112494_25112614	0.146924	HOX{A5,B5}.p2	AK087874|E330034G19Rik|105418|RIKEN cDNA E330034G19 gene	AK163316|E330034G19Rik|105418|RIKEN cDNA E330034G19 gene	AK136036|E330034G19Rik|105418|RIKEN cDNA E330034G19 gene	NM_001033214|E330034G19Rik|105418|RIKEN cDNA E330034G19 gene	BC139082|E330034G19Rik|105418|RIKEN cDNA E330034G19 gene	BC139083|E330034G19Rik|105418|RIKEN cDNA E330034G19 gene
mm9_v1_chr11_-_101087730_101087737	0.144559	HOX{A5,B5}.p2	AK154565|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)
mm9_v1_chr12_-_115170216_115170645	0.143251	HOX{A5,B5}.p2	BC092269|Ighg|380794|Immunoglobulin heavy chain (gamma polypeptide)
mm9_v1_chr15_-_98764817_98764871	0.142901	HOX{A5,B5}.p2	BC063777|Tuba1b|22143|tubulin, alpha 1B	BC108394|Tuba1b|22143|tubulin, alpha 1B	NM_011654|Tuba1b|22143|tubulin, alpha 1B	M13446|Tuba1b|22143|tubulin, alpha 1B	BC083120|Tuba1b|22143|tubulin, alpha 1B	BC108337|Tuba1b|22143|tubulin, alpha 1B	BC008117|Tuba1b|22143|tubulin, alpha 1B	BC098321|Tuba1b|22143|tubulin, alpha 1B	BC002219|Tuba1b|22143|tubulin, alpha 1B	AK151199|Tuba1b|22143|tubulin, alpha 1B	AK151809|Tuba1b|22143|tubulin, alpha 1B	AK152298|Tuba1b|22143|tubulin, alpha 1B	AK153254|Tuba1b|22143|tubulin, alpha 1B	AK137885|Tuba1b|22143|tubulin, alpha 1B	AK153064|Tuba1b|22143|tubulin, alpha 1B	AK168770|Tuba1b|22143|tubulin, alpha 1B	AK169075|Tuba1b|22143|tubulin, alpha 1B	AK150968|Tuba1b|22143|tubulin, alpha 1B	AK075955|Tuba1b|22143|tubulin, alpha 1B	AK150128|Tuba1b|22143|tubulin, alpha 1B	AK150179|Tuba1b|22143|tubulin, alpha 1B	AK164428|Tuba1b|22143|tubulin, alpha 1B	AK169092|Tuba1b|22143|tubulin, alpha 1B	AK169130|Tuba1b|22143|tubulin, alpha 1B	AK169665|Tuba1b|22143|tubulin, alpha 1B
mm9_v1_chr18_+_37607310_37607496	0.140934	HOX{A5,B5}.p2	AK032156|Pcdhb14|93885|protocadherin beta 14	NM_053139|Pcdhb14|93885|protocadherin beta 14	AK008662|Pcdhb14|93885|protocadherin beta 14	BC059821|Pcdhb14|93885|protocadherin beta 14	AK083065|Pcdhb14|93885|protocadherin beta 14	AY013775|Pcdhb14|93885|protocadherin beta 14
mm9_v1_chr7_-_140900963_140900977	0.138511	HOX{A5,B5}.p2	AK148116|Uros|22276|uroporphyrinogen III synthase	NM_009479|Uros|22276|uroporphyrinogen III synthase
mm9_v1_chr7_-_4965804_4965854	0.137202	HOX{A5,B5}.p2	BC138231|Fiz1|23877|Flt3 interacting zinc finger protein 1	BC138232|Fiz1|23877|Flt3 interacting zinc finger protein 1	BC145207|Fiz1|23877|Flt3 interacting zinc finger protein 1	AF126747|Fiz1|23877|Flt3 interacting zinc finger protein 1	BC006633|Fiz1|23877|Flt3 interacting zinc finger protein 1	NM_011813|Fiz1|23877|Flt3 interacting zinc finger protein 1
mm9_v1_chr4_+_135762279_135762338	0.136011	HOX{A5,B5}.p2	NM_001008232|Asap3|230837|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3	AK132294|Asap3|230837|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3	BC085250|Asap3|230837|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
mm9_v1_chr2_+_154026115_154026115	0.135139	HOX{A5,B5}.p2	NM_153418|U46068|228801|cDNA sequence U46068	U46068|U46068|228801|cDNA sequence U46068
mm9_v1_chr11_+_72904084_72904096	0.134007	HOX{A5,B5}.p2	U12236|Itgae|16407|integrin alpha E, epithelial-associated	AK040983|Itgae|16407|integrin alpha E, epithelial-associated	AK154021|Itgae|16407|integrin alpha E, epithelial-associated	BC150690|Itgae|16407|integrin alpha E, epithelial-associated	DQ386608|Itgae|16407|integrin alpha E, epithelial-associated	NM_008399|Itgae|16407|integrin alpha E, epithelial-associated	NM_172944|Itgae|16407|integrin alpha E, epithelial-associated
mm9_v1_chr18_+_37637421_37637642	0.130569	HOX{A5,B5}.p2	NM_053141|Pcdhb16|93887|protocadherin beta 16	AK030612|Pcdhb16|93887|protocadherin beta 16	AK036829|Pcdhb16|93887|protocadherin beta 16	BC115720|Pcdhb16|93887|protocadherin beta 16	BC116625|Pcdhb16|93887|protocadherin beta 16	AY013777|Pcdhb16|93887|protocadherin beta 16
mm9_v1_chr7_+_17307277_17307306	0.129342	HOX{A5,B5}.p2	L49180|Ceacam9|26368|carcinoembryonic antigen-related cell adhesion molecule 9	NM_011927|Ceacam9|26368|carcinoembryonic antigen-related cell adhesion molecule 9	AK049543|Ceacam9|26368|carcinoembryonic antigen-related cell adhesion molecule 9
mm9_v1_chr13_+_24419272_24419288	0.129224	HOX{A5,B5}.p2	BC028474|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase	AB061276|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase	AB061277|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase	NM_001111110|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase
mm9_v1_chr10_-_13272820_13272870	0.125679	HOX{A5,B5}.p2	BC033415|Pex3|56535|peroxisomal biogenesis factor 3	AK075820|Pex3|56535|peroxisomal biogenesis factor 3	AF152996|Pex3|56535|peroxisomal biogenesis factor 3
mm9_v1_chr17_+_56602044_56602148	0.123248	HOX{A5,B5}.p2	AK016111|4930553P13Rik|75264|RIKEN cDNA 4930553P13 gene
mm9_v1_chr1_+_75382155_75382196	0.12316	HOX{A5,B5}.p2	AK147475|Speg|11790|SPEG complex locus	NM_001085370|Speg|11790|SPEG complex locus
mm9_v1_chr4_-_143247148_143247148	0.122212	HOX{A5,B5}.p2	NM_001126325|Gm13088|277668|predicted gene 13088
mm9_v1_chr14_-_56341060_56341137	0.120701	HOX{A5,B5}.p2	AK002625|Rabggta|56187|Rab geranylgeranyl transferase, a subunit
mm9_v1_chr1_-_38014596_38014603	0.118417	HOX{A5,B5}.p2	BC119394|Lyg1|69541|lysozyme G-like 1	BC119396|Lyg1|69541|lysozyme G-like 1	AK009014|Lyg1|69541|lysozyme G-like 1	NM_027111|Lyg1|69541|lysozyme G-like 1
mm9_v1_chr19_+_5460588_5460693	0.117834	HOX{A5,B5}.p2	AK008093|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein	AK028029|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein	AK008132|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein	AK012629|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein	BC049284|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein	AK019399|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein	BC031716|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein	AF270700|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein	NM_021438|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein
mm9_v1_chr19_+_10280522_10280595	0.116615	HOX{A5,B5}.p2	NM_001163431|1810006K21Rik|69038|RIKEN cDNA 1810006K21 gene	BC058335|1810006K21Rik|69038|RIKEN cDNA 1810006K21 gene
mm9_v1_chr1_-_80336894_80337145	0.115669	HOX{A5,B5}.p2	AF129738|Cul3|26554|cullin 3	NM_016716|Cul3|26554|cullin 3	BC027304|Cul3|26554|cullin 3
mm9_v1_chr4_+_106926486_106926541	0.112202	HOX{A5,B5}.p2	BC021897|Hspb11|72938|heat shock protein family B (small), member 11	BC034465|Hspb11|72938|heat shock protein family B (small), member 11	AK013636|Hspb11|72938|heat shock protein family B (small), member 11	AK157651|Hspb11|72938|heat shock protein family B (small), member 11	NM_028394|Hspb11|72938|heat shock protein family B (small), member 11
mm9_v1_chr11_-_103224972_103225005	0.11173	HOX{A5,B5}.p2	
mm9_v1_chr8_+_4248213_4248213	0.11169	HOX{A5,B5}.p2	NM_001195258|Gm14378|100044509|predicted gene 14378
mm9_v1_chr13_+_34254827_34254896	0.110004	HOX{A5,B5}.p2	NM_001101430|Psmg4|69666|proteasome (prosome, macropain) assembly chaperone 4	NM_001110515|Psmg4|69666|proteasome (prosome, macropain) assembly chaperone 4	BC070417|Psmg4|69666|proteasome (prosome, macropain) assembly chaperone 4
mm9_v1_chr1_+_74818609_74818719	0.105555	HOX{A5,B5}.p2	M89800|Wnt6|22420|wingless-related MMTV integration site 6
mm9_v1_chr5_-_135382602_135382602	0.104319	HOX{A5,B5}.p2	AK007170|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	AY369079|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	AY369080|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	BC114542|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	NM_029681|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	NM_194065|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)
mm9_v1_chr2_+_170321927_170322026	0.104066	HOX{A5,B5}.p2	BC065407|Pfdn4|109054|prefoldin 4	NM_001013369|Pfdn4|109054|prefoldin 4	BC147673|Pfdn4|109054|prefoldin 4	BC147674|Pfdn4|109054|prefoldin 4
mm9_v1_chr5_-_26431853_26431853	0.103201	HOX{A5,B5}.p2	AK077239|5031410I06Rik|381622|RIKEN cDNA 5031410I06 gene	NM_207657|5031410I06Rik|381622|RIKEN cDNA 5031410I06 gene
mm9_v1_chr5_-_98904692_98904727	0.0958245	HOX{A5,B5}.p2	
mm9_v1_chr14_+_51823364_51823369	0.0931719	HOX{A5,B5}.p2	NM_001017422|Ear4|53877|eosinophil-associated, ribonuclease A family, member 4	NM_017389|Ear14|503847|eosinophil-associated, ribonuclease A family, member 14
mm9_v1_chr9_+_121807472_121807540	0.0930226	HOX{A5,B5}.p2	AK157140|Ccbp2|59289|chemokine binding protein 2
mm9_v1_chr5_-_24236497_24236497	0.0920292	HOX{A5,B5}.p2	BC059069|Wdr86|269633|WD repeat domain 86	NM_001081441|Wdr86|269633|WD repeat domain 86
mm9_v1_chr10_+_127691272_127691399	0.0914572	HOX{A5,B5}.p2	BC022137|Apon|28194|apolipoprotein N	BC030734|Apon|28194|apolipoprotein N
mm9_v1_chr7_-_53970378_53970477	0.0873625	HOX{A5,B5}.p2	M25467|Saa3|20210|serum amyloid A 3	X03479|Saa3|20210|serum amyloid A 3
mm9_v1_chr5_+_3928177_3928370	0.086992	HOX{A5,B5}.p2	AK031740|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	NM_194462|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	AK168404|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	AK008727|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	AK017707|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	AJ582913|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	AK080442|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9
mm9_v1_chr6_+_122503826_122503835	0.0868575	HOX{A5,B5}.p2	NM_009645|Aicda|11628|activation-induced cytidine deaminase	AF132979|Aicda|11628|activation-induced cytidine deaminase
mm9_v1_chr15_-_75262160_75262258	0.0865111	HOX{A5,B5}.p2	BC147461|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene	BC147464|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene	AK136484|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene	BC087965|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene	NM_001039720|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene
mm9_v1_chr6_-_90023011_90023011	0.0864989	HOX{A5,B5}.p2	AF132114|Vmn1r49|24112|vomeronasal 1, receptor 49	NM_011911|Vmn1r49|24112|vomeronasal 1, receptor 49
mm9_v1_chr5_-_116181560_116181567	0.08567	HOX{A5,B5}.p2	BC024804|Ccdc64|75665|coiled-coil domain containing 64	BC126948|Ccdc64|75665|coiled-coil domain containing 64	GU973876|Ccdc64|75665|coiled-coil domain containing 64	NM_001080808|Ccdc64|75665|coiled-coil domain containing 64
mm9_v1_chr7_+_15245056_15245056	0.0837615	HOX{A5,B5}.p2	BC099488|Gm4745|194588|predicted gene 4745	NM_001038676|Gm4745|194588|predicted gene 4745
mm9_v1_chr2_+_178165235_178165311	0.0832854	HOX{A5,B5}.p2	AK132328|Cdh26|381409|cadherin-like 26	BC053928|Cdh26|381409|cadherin-like 26	NM_198656|Cdh26|381409|cadherin-like 26
mm9_v1_chr2_-_152406032_152406047	0.0829631	HOX{A5,B5}.p2	AY098993|Defb19|246700|defensin beta 19	AF532614|Defb19|246700|defensin beta 19	AK133049|Defb19|246700|defensin beta 19	BC049701|Defb19|246700|defensin beta 19	DQ012035|Defb19|246700|defensin beta 19	NM_145157|Defb19|246700|defensin beta 19
mm9_v1_chr9_+_121807578_121807589	0.0809222	HOX{A5,B5}.p2	AK028281|Ccbp2|59289|chemokine binding protein 2	AK147166|Ccbp2|59289|chemokine binding protein 2	NM_021609|Ccbp2|59289|chemokine binding protein 2	AK145960|Ccbp2|59289|chemokine binding protein 2
mm9_v1_chr5_-_100407613_100407631	0.0806203	HOX{A5,B5}.p2	BC011172|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D
mm9_v1_chr5_+_114185982_114186036	0.0791317	HOX{A5,B5}.p2	AK044446|Ficd|231630|FIC domain containing	AK054325|Ficd|231630|FIC domain containing
mm9_v1_chr16_+_18249036_18249160	0.0707355	HOX{A5,B5}.p2	AK146391|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	BC046976|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	BC027431|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK034102|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK080170|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK133844|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK151422|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK153190|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK169240|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK150482|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK151311|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK151725|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK151778|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK152055|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK152201|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK152363|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK152548|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK152903|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK153043|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	BC038486|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
mm9_v1_chr7_-_4947629_4947709	0.0706972	HOX{A5,B5}.p2	AK003337|Zfp579|68490|zinc finger protein 579	AK082494|Zfp579|68490|zinc finger protein 579	AK143550|Zfp579|68490|zinc finger protein 579	NM_026741|Zfp579|68490|zinc finger protein 579	AK148159|Zfp579|68490|zinc finger protein 579
mm9_v1_chr1_+_75396650_75396733	0.0696541	HOX{A5,B5}.p2	NM_001173477|Speg|11790|SPEG complex locus
mm9_v1_chr8_+_75170609_75170675	0.0690227	HOX{A5,B5}.p2	AK087622|Nwd1|319555|NACHT and WD repeat domain containing 1	NM_176940|Nwd1|319555|NACHT and WD repeat domain containing 1	AK162888|Nwd1|319555|NACHT and WD repeat domain containing 1	AK038792|Nwd1|319555|NACHT and WD repeat domain containing 1	BC082552|Nwd1|319555|NACHT and WD repeat domain containing 1
mm9_v1_chr13_+_100897826_100897856	0.0614142	HOX{A5,B5}.p2	AK208849|Smn1|20595|survival motor neuron 1	AK214738|Smn1|20595|survival motor neuron 1
mm9_v1_chr15_-_9678531_9678622	0.0584802	HOX{A5,B5}.p2	AK041992|Spef2|320277|sperm flagellar 2	BC132098|Spef2|320277|sperm flagellar 2	BC132288|Spef2|320277|sperm flagellar 2	NM_177123|Spef2|320277|sperm flagellar 2	AK048961|Spef2|320277|sperm flagellar 2
mm9_v1_chr11_-_115138199_115138306	0.0578352	HOX{A5,B5}.p2	BC057146|Fdxr|14149|ferredoxin reductase	AK134068|Fdxr|14149|ferredoxin reductase	BC071268|Fdxr|14149|ferredoxin reductase	D49920|Fdxr|14149|ferredoxin reductase	NM_007997|Fdxr|14149|ferredoxin reductase
mm9_v1_chr14_+_65271350_65271386	0.0560838	HOX{A5,B5}.p2	AK019919|Kif13b|16554|kinesin family member 13B	NM_001081177|Kif13b|16554|kinesin family member 13B	AK031482|Kif13b|16554|kinesin family member 13B
mm9_v1_chr8_+_125930981_125931146	0.0541324	HOX{A5,B5}.p2	NM_008559|Mc1r|17199|melanocortin 1 receptor	AK148437|Mc1r|17199|melanocortin 1 receptor
mm9_v1_chr3_+_108167828_108167840	0.0532564	HOX{A5,B5}.p2	AK004148|Mybphl|68753|myosin binding protein H-like	NM_026831|Mybphl|68753|myosin binding protein H-like	BC132636|Mybphl|68753|myosin binding protein H-like	BC132638|Mybphl|68753|myosin binding protein H-like	BC089625|Mybphl|68753|myosin binding protein H-like
mm9_v1_chr7_+_120351012_120351092	0.0493346	HOX{A5,B5}.p2	BC011080|Arntl|11865|aryl hydrocarbon receptor nuclear translocator-like	AK143267|Arntl|11865|aryl hydrocarbon receptor nuclear translocator-like	AB014494|Arntl|11865|aryl hydrocarbon receptor nuclear translocator-like
mm9_v1_chr2_+_154959216_154959300	0.0484695	HOX{A5,B5}.p2	NM_008395|Itch|16396|itchy, E3 ubiquitin protein ligase	AK082003|Itch|16396|itchy, E3 ubiquitin protein ligase	AK163006|Itch|16396|itchy, E3 ubiquitin protein ligase	AK141800|Itch|16396|itchy, E3 ubiquitin protein ligase	AK037940|Itch|16396|itchy, E3 ubiquitin protein ligase	BC062934|Itch|16396|itchy, E3 ubiquitin protein ligase	AK020167|Itch|16396|itchy, E3 ubiquitin protein ligase	AK220164|Itch|16396|itchy, E3 ubiquitin protein ligase	AK048303|Itch|16396|itchy, E3 ubiquitin protein ligase	BC064678|Itch|16396|itchy, E3 ubiquitin protein ligase	AF037454|Itch|16396|itchy, E3 ubiquitin protein ligase
mm9_v1_chr6_+_33979444_33979454	0.0481601	HOX{A5,B5}.p2	AK014976|Lrguk|74354|leucine-rich repeats and guanylate kinase domain containing	NM_028886|Lrguk|74354|leucine-rich repeats and guanylate kinase domain containing	AK029666|Lrguk|74354|leucine-rich repeats and guanylate kinase domain containing	AK045903|Lrguk|74354|leucine-rich repeats and guanylate kinase domain containing
mm9_v1_chr12_+_59312790_59312790	0.0469957	HOX{A5,B5}.p2	AK046464|Sstr1|20605|somatostatin receptor 1	NM_009216|Sstr1|20605|somatostatin receptor 1
mm9_v1_chr8_+_11556062_11556065	0.0468996	HOX{A5,B5}.p2	AK145553|Ing1|26356|inhibitor of growth family, member 1	AK076482|Ing1|26356|inhibitor of growth family, member 1	AK141466|Ing1|26356|inhibitor of growth family, member 1	AF177757|Ing1|26356|inhibitor of growth family, member 1	NM_011919|Ing1|26356|inhibitor of growth family, member 1
mm9_v1_chr9_+_7628229_7628230	0.046068	HOX{A5,B5}.p2	BC152335|Mmp20|30800|matrix metallopeptidase 20 (enamelysin)	BC152336|Mmp20|30800|matrix metallopeptidase 20 (enamelysin)	AF155933|Mmp20|30800|matrix metallopeptidase 20 (enamelysin)	NM_013903|Mmp20|30800|matrix metallopeptidase 20 (enamelysin)
mm9_v1_chr12_-_30817451_30817473	0.0429405	HOX{A5,B5}.p2	AK047843|Tpo|22018|thyroid peroxidase	NM_009417|Tpo|22018|thyroid peroxidase	X60703|Tpo|22018|thyroid peroxidase
mm9_v1_chr3_-_129525375_129525422	0.0416438	HOX{A5,B5}.p2	BC046288|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK044717|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AF012271|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK021379|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	NM_009102|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog
mm9_v1_chr11_-_109856977_109857129	0.0398661	HOX{A5,B5}.p2	BC089557|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	AK173034|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	BC141401|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	AF498362|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	AK138196|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	NM_013851|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b
mm9_v1_chr2_+_152788220_152788276	0.0386418	HOX{A5,B5}.p2	AK006027|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	NM_001083618|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	NM_029064|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	AK015388|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	AK015740|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	BC130024|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	BC148285|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	AM690753|Ttll9|74711|tubulin tyrosine ligase-like family, member 9
mm9_v1_chr19_+_8840883_8840977	0.0386342	HOX{A5,B5}.p2	AK052937|Nxf1|53319|nuclear RNA export factor 1 homolog (S. cerevisiae)
mm9_v1_chr7_+_51565563_51565633	0.0332476	HOX{A5,B5}.p2	NM_001034115|Shank1|243961|SH3/ankyrin domain gene 1
mm9_v1_chr5_+_91201460_91201461	0.0332207	HOX{A5,B5}.p2	AK159278|Pf4|56744|platelet factor 4	AK160040|Pf4|56744|platelet factor 4	NM_019932|Pf4|56744|platelet factor 4
mm9_v1_chr17_-_32524703_32524761	0.0330049	HOX{A5,B5}.p2	AB255388|Wiz|22404|widely-interspaced zinc finger motifs	NM_212438|Wiz|22404|widely-interspaced zinc finger motifs
mm9_v1_chr18_+_74375754_74375784	0.0325345	HOX{A5,B5}.p2	AK017941|Cxxc1|74322|CXXC finger 1 (PHD domain)	AK146688|Cxxc1|74322|CXXC finger 1 (PHD domain)
mm9_v1_chr6_+_70321430_70321482	0.0313966	HOX{A5,B5}.p2	
mm9_v1_chr4_+_134066913_134066990	0.0277545	HOX{A5,B5}.p2	NM_001081099|2610002D18Rik|69885|RIKEN cDNA 2610002D18 gene	BC138271|2610002D18Rik|69885|RIKEN cDNA 2610002D18 gene	AK011279|2610002D18Rik|69885|RIKEN cDNA 2610002D18 gene
mm9_v1_chr17_+_47522341_47522420	0.0267908	HOX{A5,B5}.p2	BC031916|Guca1b|107477|guanylate cyclase activator 1B	NM_146079|Guca1b|107477|guanylate cyclase activator 1B	BC033358|Guca1b|107477|guanylate cyclase activator 1B	BC018480|Guca1b|107477|guanylate cyclase activator 1B	AK033052|Guca1b|107477|guanylate cyclase activator 1B	BC031367|Guca1b|107477|guanylate cyclase activator 1B	BC033383|Guca1b|107477|guanylate cyclase activator 1B	BC024810|Guca1b|107477|guanylate cyclase activator 1B	BC029661|Guca1b|107477|guanylate cyclase activator 1B	BC033380|Guca1b|107477|guanylate cyclase activator 1B	BC034595|Guca1b|107477|guanylate cyclase activator 1B	BC033423|Guca1b|107477|guanylate cyclase activator 1B	BC033348|Guca1b|107477|guanylate cyclase activator 1B	BC033364|Guca1b|107477|guanylate cyclase activator 1B	BC033396|Guca1b|107477|guanylate cyclase activator 1B	BC034331|Guca1b|107477|guanylate cyclase activator 1B	BC029017|Guca1b|107477|guanylate cyclase activator 1B	BC018258|Guca1b|107477|guanylate cyclase activator 1B
mm9_v1_chr10_-_102491392_102491410	0.0265156	HOX{A5,B5}.p2	BC052200|Alx1|216285|ALX homeobox 1	AK047846|Alx1|216285|ALX homeobox 1	NM_172553|Alx1|216285|ALX homeobox 1
mm9_v1_chr16_-_88878143_88878282	0.024553	HOX{A5,B5}.p2	AF345296|Krtap16-6|170655|keratin associated protein 16-6	AF345295|Krtap16-5|77918|keratin associated protein 16-5	BC115545|Krtap16-5|77918|keratin associated protein 16-5	BC115546|Krtap16-5|77918|keratin associated protein 16-5	AK020697|Krtap16-5|77918|keratin associated protein 16-5	NM_130857|Krtap16-5|77918|keratin associated protein 16-5
mm9_v1_chr19_-_11410534_11410635	0.0237133	HOX{A5,B5}.p2	AK085297|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC019784|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC024402|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AF237917|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_027836|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK149890|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK018686|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK151261|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK152098|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_001025610|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK046559|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7
mm9_v1_chr7_+_15974199_15974319	0.0230328	HOX{A5,B5}.p2	NM_145708|Obox2|246792|oocyte specific homeobox 2	BC094912|Obox2|246792|oocyte specific homeobox 2
mm9_v1_chr19_+_10788964_10788976	0.0230167	HOX{A5,B5}.p2	
mm9_v1_chr10_+_127691166_127691233	0.0189091	HOX{A5,B5}.p2	NM_133996|Apon|28194|apolipoprotein N	AK083289|Apon|28194|apolipoprotein N
mm9_v1_chr8_-_97958656_97958727	0.0163912	HOX{A5,B5}.p2	BC092397|Gtl3|14894|gene trap locus 3	BC119023|Gtl3|14894|gene trap locus 3	BC119025|Gtl3|14894|gene trap locus 3	BC144770|Gtl3|14894|gene trap locus 3	AK088713|Gtl3|14894|gene trap locus 3	Z54179|Gtl3|14894|gene trap locus 3	AK011217|Gtl3|14894|gene trap locus 3
mm9_v1_chr9_+_122943854_122943866	0.0161722	HOX{A5,B5}.p2	AK035279|Tgm4|331046|transglutaminase 4 (prostate)	NM_177911|Tgm4|331046|transglutaminase 4 (prostate)	AF486627|Tgm4|331046|transglutaminase 4 (prostate)	BC141297|Tgm4|331046|transglutaminase 4 (prostate)	BC145622|Tgm4|331046|transglutaminase 4 (prostate)
mm9_v1_chr6_-_83075022_83075189	0.0143575	HOX{A5,B5}.p2	NM_023547|Ino80b|70020|INO80 complex subunit B	BC019383|Ino80b|70020|INO80 complex subunit B	BC047990|Ino80b|70020|INO80 complex subunit B	BC058788|Ino80b|70020|INO80 complex subunit B	AK010946|Ino80b|70020|INO80 complex subunit B
mm9_v1_chr8_+_3621533_3621602	0.0124383	HOX{A5,B5}.p2	AK013674|2900053A13Rik|554362|RIKEN cDNA 2900053A13 gene	AK079971|2900053A13Rik|554362|RIKEN cDNA 2900053A13 gene	NM_001195244|2900053A13Rik|554362|RIKEN cDNA 2900053A13 gene	AK011549|2900053A13Rik|554362|RIKEN cDNA 2900053A13 gene
mm9_v1_chr10_+_52111413_52111541	0.00927584	HOX{A5,B5}.p2	AK017780|Nepn|66650|nephrocan	AY938536|Nepn|66650|nephrocan	NM_025684|Nepn|66650|nephrocan	AK017656|Nepn|66650|nephrocan	BC132046|Nepn|66650|nephrocan	BC132048|Nepn|66650|nephrocan	AK017842|Nepn|66650|nephrocan
mm9_v1_chr18_+_85104396_85104433	0.0059753	HOX{A5,B5}.p2	AK082809|Fbxo15|50764|F-box protein 15	AK163224|Fbxo15|50764|F-box protein 15	AK166591|Fbxo15|50764|F-box protein 15	AK166599|Fbxo15|50764|F-box protein 15	AK167118|Fbxo15|50764|F-box protein 15	NM_015798|Fbxo15|50764|F-box protein 15	AK167270|Fbxo15|50764|F-box protein 15	AK166918|Fbxo15|50764|F-box protein 15	AF176530|Fbxo15|50764|F-box protein 15
mm9_v1_chr5_-_26365912_26366044	0.00544582	HOX{A5,B5}.p2	BC145097|Gm10471|100039045|predicted gene 10471	AK006439|Speer4a|75657|spermatogenesis associated glutamate (E)-rich protein 4a	NM_029376|Speer4a|75657|spermatogenesis associated glutamate (E)-rich protein 4a
mm9_v1_chrX_-_131285919_131285957	0.0052882	HOX{A5,B5}.p2	BC027264|Armcx6|278097|armadillo repeat containing, X-linked 6	AK148507|Armcx6|278097|armadillo repeat containing, X-linked 6	AK160766|Armcx6|278097|armadillo repeat containing, X-linked 6	NM_001007578|Armcx6|278097|armadillo repeat containing, X-linked 6
mm9_v1_chr18_+_36687800_36687810	0.00447974	HOX{A5,B5}.p2	AK143939|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK085424|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK128930|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK142545|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK085269|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	NM_172830|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	BC113179|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	BC113785|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9
mm9_v1_chr2_+_122573252_122573297	0.00401466	HOX{A5,B5}.p2	AK206166|Pldn|18457|pallidin
mm9_v1_chr7_-_4966232_4966265	0.00384621	HOX{A5,B5}.p2	AF126746|Fiz1|23877|Flt3 interacting zinc finger protein 1	BC106113|Fiz1|23877|Flt3 interacting zinc finger protein 1	AK162454|Fiz1|23877|Flt3 interacting zinc finger protein 1	AK170633|Fiz1|23877|Flt3 interacting zinc finger protein 1	AK139120|Fiz1|23877|Flt3 interacting zinc finger protein 1	AK220212|Fiz1|23877|Flt3 interacting zinc finger protein 1
mm9_v1_chr10_-_13043959_13044096	0.00275217	HOX{A5,B5}.p2	BC130264|Phactr2|215789|phosphatase and actin regulator 2	AK142930|Phactr2|215789|phosphatase and actin regulator 2	NM_001033257|Phactr2|215789|phosphatase and actin regulator 2	NM_001195096|Phactr2|215789|phosphatase and actin regulator 2
mm9_v1_chr10_+_127691240_127691249	0.00127931	HOX{A5,B5}.p2	BC034832|Apon|28194|apolipoprotein N
mm9_v1_chr11_-_101087738_101087767	0.00102716	HOX{A5,B5}.p2	AK045374|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK138942|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	U60453|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK164192|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK140694|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	NM_007970|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)
mm9_v1_chr7_+_29325883_29325903	0.000634454	HOX{A5,B5}.p2	AK003083|Sycn|68416|syncollin	BC019567|Sycn|68416|syncollin	NM_026716|Sycn|68416|syncollin
mm9_v1_chr15_+_102275797_102275866	0.000551367	HOX{A5,B5}.p2	NM_144547|Amhr2|110542|anti-Mullerian hormone type 2 receptor	AF503863|Amhr2|110542|anti-Mullerian hormone type 2 receptor	BC119571|Amhr2|110542|anti-Mullerian hormone type 2 receptor
mm9_v1_chr15_+_98905403_98905455	2.00378e-05	HOX{A5,B5}.p2	NM_001162506|Troap|78733|trophinin associated protein	NM_030159|Troap|78733|trophinin associated protein	AK050381|Troap|78733|trophinin associated protein	AK077509|Troap|78733|trophinin associated protein	AK021408|Troap|78733|trophinin associated protein	BC100405|Troap|78733|trophinin associated protein	BC080746|Troap|78733|trophinin associated protein
